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prp40 [nucleoplasm]
Stable Identifier
R-DDI-8867890
Type
Protein [EntityWithAccessionedSequence]
Species
Dictyostelium discoideum
Compartment
nucleoplasm
Synonyms
PRPF40A, Q54QY2
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Dictyostelium discoideum)
Processing of Capped Intron-Containing Pre-mRNA (Dictyostelium discoideum)
mRNA 3'-end processing (Dictyostelium discoideum)
mRNA Polyadenylation (Dictyostelium discoideum)
Core CPA complex binds capped pre-mRNA (Dictyostelium discoideum)
Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Dictyostelium discoideum)
prp40 [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Dictyostelium discoideum)
prp40 [nucleoplasm] (Dictyostelium discoideum)
PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS (Dictyostelium discoideum)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Dictyostelium discoideum)
prp40 [nucleoplasm] (Dictyostelium discoideum)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Dictyostelium discoideum)
prp40 [nucleoplasm] (Dictyostelium discoideum)
PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS (Dictyostelium discoideum)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Dictyostelium discoideum)
prp40 [nucleoplasm] (Dictyostelium discoideum)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at intronic PAS) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Dictyostelium discoideum)
prp40 [nucleoplasm] (Dictyostelium discoideum)
PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS (Dictyostelium discoideum)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Dictyostelium discoideum)
prp40 [nucleoplasm] (Dictyostelium discoideum)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Dictyostelium discoideum)
prp40 [nucleoplasm] (Dictyostelium discoideum)
PP1 dephosphorylates RNA Pol II (Dictyostelium discoideum)
CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Dictyostelium discoideum)
prp40 [nucleoplasm] (Dictyostelium discoideum)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Dictyostelium discoideum)
prp40 [nucleoplasm] (Dictyostelium discoideum)
RBBP6 activates CPSF complex (Dictyostelium discoideum)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Dictyostelium discoideum)
prp40 [nucleoplasm] (Dictyostelium discoideum)
Ub-K63-CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser2 dephosphorylated) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Dictyostelium discoideum)
prp40 [nucleoplasm] (Dictyostelium discoideum)
External Reference Information
External Reference
UniProt:Q54QY2
Gene Names
prp40
Reference Genes
BioGPS Gene:8624132 prp40
dictyBase:DDB_G0283543
ENSEMBL:DDB_G0283543
KEGG:ddi:DDB_G0283543 prp40
Monarch:8624132 prp40
NCBI Gene:8624132 prp40
UCSC:Q54QY2 prp40
Reference Transcript
RefSeq:XM_633910.1 prp40
Participates
as a component of
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal A complex (capped, methylated, polyadenylated pre-mRNA) [nucleoplasm] (Dictyostelium discoideum)
Spliceosomal Pre-B complex [nucleoplasm] (Dictyostelium discoideum)
Inferred From
PRPF40A [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_639002.1
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