UniProt:Q9Y253 POLH

chain
  • chain:1-713
checksum 6D1D35A0F56ECE89
comment
  • FUNCTION DNA polymerase specifically involved in the DNA repair by translesion synthesis (TLS) (PubMed:10385124, PubMed:11743006, PubMed:16357261, PubMed:20388628, PubMed:24449906, PubMed:24553286, PubMed:38212351). Due to low processivity on both damaged and normal DNA, cooperates with the heterotetrameric (REV3L, REV7, POLD2 and POLD3) POLZ complex for complete bypass of DNA lesions. Inserts one or 2 nucleotide(s) opposite the lesion, the primer is further extended by the tetrameric POLZ complex. In the case of 1,2-intrastrand d(GpG)-cisplatin cross-link, inserts dCTP opposite the 3' guanine (PubMed:24449906). Particularly important for the repair of UV-induced pyrimidine dimers (PubMed:10385124, PubMed:11743006). Although inserts the correct base, may cause base transitions and transversions depending upon the context. May play a role in hypermutation at immunoglobulin genes (PubMed:11376341, PubMed:14734526). Forms a Schiff base with 5'-deoxyribose phosphate at abasic sites, but does not have any lyase activity, preventing the release of the 5'-deoxyribose phosphate (5'-dRP) residue. This covalent trapping of the enzyme by the 5'-dRP residue inhibits its DNA synthetic activity during base excision repair, thereby avoiding high incidence of mutagenesis (PubMed:14630940). Targets POLI to replication foci (PubMed:12606586).CATALYTIC ACTIVITY DNA(n) + a 2'-deoxyribonucleoside 5'-triphosphate = DNA(n+1) + diphosphateCOFACTOR Binds 2 Mg(2+) (PubMed:27284197). Prefers Mg(2+), but can also use Mn(2+) (PubMed:27284197). In vitro, can also utilize other divalent cations such as Ca(2+) (PubMed:27284197).ACTIVITY REGULATION The enzyme in complex with the DNA substrate binds a third divalent metal cation (PubMed:27284197). The binding of this third divalent cation, which is coordinated by water molecules and two oxygen atoms from DNA and dNTP, is essential for catalyzing the DNA synthesis (PubMed:27284197).BIOPHYSICOCHEMICAL PROPERTIES Interacts with REV1 (via C-terminal domain) (PubMed:22691049). Interacts with monoubiquitinated PCNA, but not unmodified PCNA (PubMed:15149598). Interacts with POLI; this interaction targets POLI to the replication machinery (PubMed:12606586). Interacts with PALB2 and BRCA2; the interactions are direct and are required to sustain the recruitment of POLH at blocked replication forks and to stimulate POLH-dependent DNA synthesis on D loop substrates (PubMed:24485656). Interacts (via C-terminus) with TRAIP (PubMed:24553286). Interacts with ubiquitin (PubMed:16357261). Interacts with POLDIP2 (PubMed:20554254).SUBCELLULAR LOCATION Binding to ubiquitinated PCNA mediates colocalization to replication foci during DNA replication and persists at sites of stalled replication forks following UV irradiation (PubMed:12606586, PubMed:16357261, PubMed:24553286). After UV irradiation, recruited to DNA damage sites within 1 hour, to a maximum of about 80%; this recruitment may not be not restricted to cells active in DNA replication (PubMed:22801543). Colocalizes with TRAIP to nuclear foci (PubMed:24553286).ALTERNATIVE PRODUCTS The catalytic core consists of fingers, palm and thumb subdomains, but the fingers and thumb subdomains are much smaller than in high-fidelity polymerases; residues from five sequence motifs of the Y-family cluster around an active site cleft that can accommodate DNA and nucleotide substrates with relaxed geometric constraints, with consequently higher rates of misincorporation and low processivity.DOMAIN The UBZ3-type zinc finger domain and the PIP-box mediate the interaction with ubiquitinated PCNA and are both necessary for the enzymatic activity in translesion synthesis.PTM Monoubiquitinated by RCHY1/PIRH2 (PubMed:20159558, PubMed:21791603). Ubiquitination depends on integrity of the UBZ3-type zinc finger domain and is enhanced by TRAIP (PubMed:16357261, PubMed:24553286). Ubiquitination inhibits the ability of PolH to interact with PCNA and to bypass UV-induced lesions (PubMed:20159558, PubMed:21791603, PubMed:24553286).DISEASE The disease is caused by variants affecting the gene represented in this entry.SIMILARITY Belongs to the DNA polymerase type-Y family.
created [InstanceEdit:110274] Gopinathrao, G, 2004-01-29 18:08:32
crossReference
databaseName UniProt
dbId 110286
description
  • recommendedName: DNA polymerase eta ecNumber evidence="19 29 30"2.7.7.7 alternativeName: RAD30 homolog A alternativeName: Xeroderma pigmentosum variant type protein
displayName UniProt:Q9Y253 POLH
geneName
  • POLH
  • RAD30
  • RAD30A
  • XPV
identifier Q9Y253
isSequenceChanged false
keyword
  • 3D-structure
  • Alternative splicing
  • Direct protein sequencing
  • Disease variant
  • DNA damage
  • DNA repair
  • DNA replication
  • DNA synthesis
  • DNA-binding
  • DNA-directed DNA polymerase
  • Isopeptide bond
  • Magnesium
  • Metal-binding
  • Mutator protein
  • Nucleotidyltransferase
  • Nucleus
  • Proteomics identification
  • Reference proteome
  • Schiff base
  • Transferase
  • Ubl conjugation
  • Xeroderma pigmentosum
  • Zinc
  • Zinc-finger
modified [InstanceEdit:9983091] Weiser, Joel, 2026-02-20
moleculeType Protein
name
  • POLH
otherIdentifier
  • 11729178_at
  • 11729179_x_at
  • 11752223_x_at
  • 11754902_a_at
  • 1557700_PM_at
  • 1557700_at
  • 1557701_PM_s_at
  • 1557701_s_at
  • 17009054
  • 219380_3p_x_at
  • 219380_PM_x_at
  • 219380_x_at
  • 222879_PM_s_at
  • 222879_s_at
  • 231115_PM_at
  • 231115_at
  • 233852_PM_at
  • 233852_at
  • 2908101
  • 2908103
  • 2908104
  • 2908105
  • 2908108
  • 2908109
  • 2908110
  • 2908111
  • 2908112
  • 2908118
  • 2908119
  • 2908120
  • 2908121
  • 2908122
  • 2908123
  • 2908124
  • 2908125
  • 2908126
  • 2908127
  • 2908128
  • 2908129
  • 2908130
  • 2908131
  • 2908132
  • 2908133
  • 2908134
  • 2908135
  • 2908136
  • 2908138
  • 2908141
  • 2908143
  • 3828219
  • 5429
  • 8119858
  • 81712_at
  • A_14_P113059
  • A_14_P118268
  • A_32_P69492
  • A_32_P96692
  • GE79909
  • GO:0000731
  • GO:0003677
  • GO:0003684
  • GO:0003824
  • GO:0003887
  • GO:0005515
  • GO:0005634
  • GO:0005654
  • GO:0005657
  • GO:0005829
  • GO:0006260
  • GO:0006281
  • GO:0006282
  • GO:0006290
  • GO:0006301
  • GO:0006974
  • GO:0008270
  • GO:0009314
  • GO:0010225
  • GO:0016740
  • GO:0016779
  • GO:0034061
  • GO:0035861
  • GO:0042276
  • GO:0046872
  • GO:0070987
  • GO:0071494
  • GO:0071897
  • GO:0140097
  • HMNXSV003025742
  • HMNXSV003026209
  • Hs.123140.0.A1_3p_at
  • Hs.155573.1.S1_3p_at
  • Hs2.407274.1.A1_3p_s_at
  • ILMN_1658221
  • ILMN_2136576
  • PH_hs_0009372
  • TC06000605.hg
  • g5457143_3p_a_at
physicalEntity
referenceDatabase [ReferenceDatabase:2] UniProt
referenceGene
referenceTranscript
schemaClass ReferenceGeneProduct
secondaryIdentifier
  • POLH_HUMAN
  • Q7L8E3
  • Q96BC4
  • Q9BX13
sequenceLength 713
species [Species:48887] Homo sapiens
stId uniprot:Q9Y253
url http://purl.uniprot.org/uniprot/Q9Y253
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