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Schema
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BlackBoxEvent
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Entries
Expression of ZIC1 in the neural plate border
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authored
[InstanceEdit:9835276] May, Bruce, 2023-05-12
category
omitted
compartment
[Compartment:7660] nucleoplasm
created
[InstanceEdit:9835286] May, Bruce, 2023-05-12
dbId
9835290
displayName
Expression of ZIC1 in the neural plate border
edited
[InstanceEdit:9835276] May, Bruce, 2023-05-12
input
[EntityWithAccessionedSequence:R-GGA-9835297] ZIC1 gene [nucleoplasm]
isChimeric
false
isInDisease
false
isInferred
false
literatureReference
[LiteratureReference:9835289] Comprehensive spatiotemporal analysis of early chick neural crest network genes
[LiteratureReference:9834886] Heterodimerization of TFAP2 pioneer factors drives epigenomic remodeling during neural crest specification
[LiteratureReference:9835635] Pluripotency factors are repurposed to shape the epigenomic landscape of neural crest cells
[LiteratureReference:9836028] Single-cell atlas of early chick development reveals gradual segregation of neural crest lineage from the neural plate border during neurulation
maxDepth
1
modified
[InstanceEdit:9851582] May, Bruce, 2023-10-28
name
Expression of ZIC1 in the neural plate border
orthologousEvent
[BlackBoxEvent:R-HSA-9835244] Expression of ZIC1 in the neural plate border - Homo sapiens
output
[EntityWithAccessionedSequence:R-GGA-9835292] ZIC1 [nucleoplasm]
regulatedBy
[PositiveGeneExpressionRegulation:9835638] Positive gene expression regulation by 'POU5F3:SOX2:ZIC1 gene [nucleoplasm]'
[PositiveGeneExpressionRegulation:9836114] Positive gene expression regulation by 'TFAP2A [nucleoplasm]'
regulationReference
[RegulationReference:9835615] Positive gene expression regulation by 'POU5F3:SOX2:ZIC1 gene [nucleoplasm]' Pluripotency factors are repurposed to shape the epigenomic landscape of neural crest cells
[RegulationReference:9836117] Positive gene expression regulation by 'TFAP2A [nucleoplasm]' Heterodimerization of TFAP2 pioneer factors drives epigenomic remodeling during neural crest specification
releaseDate
2023-12-06
reviewStatus
[ReviewStatus:9821382] five stars
reviewed
[InstanceEdit:9851580] Gunhaga, Lena, 2023-10-28
[InstanceEdit:9851576] Patthey, Cédric, 2023-10-28
schemaClass
BlackBoxEvent
species
[Species:49591] Gallus gallus
stId
R-GGA-9835290
summation
[Summation:9836107] During gastrulation (HH stage 4), ZIC1 is expressed in neura...
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