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smg5 [cytosol]
Stable Identifier
R-XTR-927867
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
cytosol
Synonyms
SMG5, Q05B16
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Xenopus tropicalis)
Nonsense-Mediated Decay (NMD) (Xenopus tropicalis)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Xenopus tropicalis)
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Xenopus tropicalis)
mRNA Cleaved by SMG6 [cytosol] (Xenopus tropicalis)
smg5 [cytosol] (Xenopus tropicalis)
smg5 [cytosol] (Xenopus tropicalis)
SMG6 hydrolyzes mRNA with premature termination codon (Xenopus tropicalis)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Xenopus tropicalis)
smg5 [cytosol] (Xenopus tropicalis)
mRNA Cleaved by SMG6 [cytosol] (Xenopus tropicalis)
smg5 [cytosol] (Xenopus tropicalis)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Xenopus tropicalis)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Xenopus tropicalis)
smg5 [cytosol] (Xenopus tropicalis)
smg5 [cytosol] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:Q05B16
Gene Names
smg5
Reference Genes
BioGPS Gene:780078 smg5
ENSEMBL:ENSXETG00000033791
KEGG Gene (Xenopus tropicalis):780078 smg5
Monarch:780078 smg5
NCBI Gene:780078 smg5
Reference Transcript
RefSeq:NM_001079154.1 smg5
Other Identifiers
780078
GO:0000184
GO:0005634
GO:0005737
GO:0016071
GO:0043226
Participates
as an output of
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Xenopus tropicalis)
as an input of
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Xenopus tropicalis)
as a component of
mRNA Cleaved by SMG6 [cytosol] (Xenopus tropicalis)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Xenopus tropicalis)
Inferred From
SMG5 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_001072622.1
Xenbase
XB-GENE-5905793
Ensembl
ENSXETG00000033791
,
ENSXETT00000077318
,
ENSXETP00000076229
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