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ddb2 [nucleoplasm]
Stable Identifier
R-XTR-5696654
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
nucleoplasm
Synonyms
PAR-DDB2, Q66JG1
Locations in the PathwayBrowser
Expand all
DNA Repair (Xenopus tropicalis)
Nucleotide Excision Repair (Xenopus tropicalis)
Global Genome Nucleotide Excision Repair (GG-NER) (Xenopus tropicalis)
DNA Damage Recognition in GG-NER (Xenopus tropicalis)
PARP1 or PARP2 PARylates DDB2 and autoPARylates (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:PAR-PARP1,PAR-PARP2 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
DDB1:PAR-DDB2 [nucleoplasm] (Xenopus tropicalis)
ddb2 [nucleoplasm] (Xenopus tropicalis)
Dual Incision in GG-NER (Xenopus tropicalis)
5'- incision of DNA by ERCC1:ERCC4 in GG-NER (Xenopus tropicalis)
GG-NER incision complex:5'-incised damaged DNA [nucleoplasm] (Xenopus tropicalis)
PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
DDB1:PAR-DDB2 [nucleoplasm] (Xenopus tropicalis)
ddb2 [nucleoplasm] (Xenopus tropicalis)
GG-NER incision complex:Open bubble dsDNA [nucleoplasm] (Xenopus tropicalis)
GG-NER pre-incision complex:Open bubble-dsDNA [nucleoplasm] (Xenopus tropicalis)
Open bubble-dsDNA:PAR-UV-DDB:TFIIH Core:XPA:PAR-PARP1, PAR-PARP2:CHD1L [nucleoplasm] (Xenopus tropicalis)
PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
DDB1:PAR-DDB2 [nucleoplasm] (Xenopus tropicalis)
ddb2 [nucleoplasm] (Xenopus tropicalis)
Formation of Incision Complex in GG-NER (Xenopus tropicalis)
ERCC2 and ERCC3 DNA helicases form an open bubble structure in damaged DNA (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:TFIIH Core:XPA:PAR-PARP1,PAR-PARP2:CHD1L [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:TFIIH Core:XPA:PAR-PARP1,PAR-PARP2 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:PAR-PARP1,PAR-PARP2 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
DDB1:PAR-DDB2 [nucleoplasm] (Xenopus tropicalis)
ddb2 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Open bubble-dsDNA:PAR-UV-DDB:TFIIH Core:XPA:PAR-PARP1,PAR-PARP2:CHD1L [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Open bubble-dsDNA:PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
DDB1:PAR-DDB2 [nucleoplasm] (Xenopus tropicalis)
ddb2 [nucleoplasm] (Xenopus tropicalis)
Recruitment of XPA and release of CAK (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:TFIIH Core:XPA:PAR-PARP1,PAR-PARP2 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:PAR-PARP1,PAR-PARP2 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
DDB1:PAR-DDB2 [nucleoplasm] (Xenopus tropicalis)
ddb2 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:TFIIH:PAR-PARP1,PAR-PARP2 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:PAR-PARP1,PAR-PARP2 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
DDB1:PAR-DDB2 [nucleoplasm] (Xenopus tropicalis)
ddb2 [nucleoplasm] (Xenopus tropicalis)
TFIIH binds GG-NER site to form a verification complex (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:PAR-PARP1,PAR-PARP2 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
DDB1:PAR-DDB2 [nucleoplasm] (Xenopus tropicalis)
ddb2 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:TFIIH:PAR-PARP1,PAR-PARP2 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:PAR-PARP1,PAR-PARP2 [nucleoplasm] (Xenopus tropicalis)
Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
PAR-UV-DDB [nucleoplasm] (Xenopus tropicalis)
DDB1:PAR-DDB2 [nucleoplasm] (Xenopus tropicalis)
ddb2 [nucleoplasm] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:Q66JG1
Gene Names
ddb2
Reference Genes
BioGPS Gene:493565 ddb2
ENSEMBL:ENSXETG00000003980
KEGG Gene (Xenopus tropicalis):493565 ddb2
Monarch:493565 ddb2
NCBI Gene:493565 ddb2
Reference Transcript
RefSeq:NM_001008202.1 ddb2
Other Identifiers
493565
GO:0003677
GO:0003684
GO:0005515
GO:0005634
GO:0005694
GO:0006281
GO:0006289
GO:0006974
GO:0016020
GO:0016567
GO:0036211
GO:0043226
GO:0080008
GO:0090734
Participates
as a component of
DDB1:PAR-DDB2 [nucleoplasm] (Xenopus tropicalis)
Other forms of this molecule
ddb2 [nucleoplasm]
ddb2 [nucleoplasm]
Inferred From
PAR-DDB2 [nucleoplasm]
(Homo sapiens)
Modified Residues
Name
L-glutamyl-5-poly(ADP-ribose) at unknown position
PsiMod Name
L-glutamyl-5-poly(ADP-ribose)
PsiMod Definition
A protein modification that effectively converts an L-glutamic acid residue to L-glutamyl-5-poly(ADP-ribose).
Cross References
RefSeq
NP_001008203.1
Xenbase
XB-GENE-971828
Ensembl
ENSXETP00000008619
,
ENSXETG00000003980
,
ENSXETP00000115662
,
ENSXETT00000008619
,
ENSXETT00000124518
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