Reactome | LOC100485124 [nucleoplasm]

LOC100485124 [nucleoplasm]

Stable Identifier

R-XTR-2248869

Type

Protein [EntityWithAccessionedSequence]

Species

Xenopus tropicalis

Compartment

nucleoplasm

Synonyms

ZNF669, A0A6I8RU61

Locations in the PathwayBrowser

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Gene expression (Transcription) (Xenopus tropicalis)

- Epigenetic regulation of gene expression (Xenopus tropicalis)
  - Regulation of endogenous retroelements (Xenopus tropicalis)
    - Regulation of endogenous retroelements by KRAB-ZFP proteins (Xenopus tropicalis)
      - KRAB-ZFP binds retroelement DNA in chromatin (Xenopus tropicalis)
        
        KRAB-ZFP:retroelement chromatin [nucleoplasm] (Xenopus tropicalis)
        
        KRAB-ZFPs that bind, repress retroelements [nucleoplasm] (Xenopus tropicalis)
        
        Homologues of ZNF669 [nucleoplasm] (Xenopus tropicalis)
        
        LOC100485124 [nucleoplasm] (Xenopus tropicalis)
        
        KRAB-ZFPs that bind, repress retroelements [nucleoplasm] (Xenopus tropicalis)
        
        Homologues of ZNF669 [nucleoplasm] (Xenopus tropicalis)
        
        LOC100485124 [nucleoplasm] (Xenopus tropicalis)
      - SETDB1 in ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement trimethylates lysine-9 of histone H3 in nucleosomes (Xenopus tropicalis)
        
        ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin [nucleoplasm] (Xenopus tropicalis)
        
        KRAB-ZFP:retroelement chromatin [nucleoplasm] (Xenopus tropicalis)
        
        KRAB-ZFPs that bind, repress retroelements [nucleoplasm] (Xenopus tropicalis)
        
        Homologues of ZNF669 [nucleoplasm] (Xenopus tropicalis)
        
        LOC100485124 [nucleoplasm] (Xenopus tropicalis)
        
        ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin with H3K9me3 [nucleoplasm] (Xenopus tropicalis)
        
        KRAB-ZFP:retroelement chromatin with H3K9me3 [nucleoplasm] (Xenopus tropicalis)
        
        KRAB-ZFPs that bind, repress retroelements [nucleoplasm] (Xenopus tropicalis)
        
        Homologues of ZNF669 [nucleoplasm] (Xenopus tropicalis)
        
        LOC100485124 [nucleoplasm] (Xenopus tropicalis)

External Reference Information

External Reference

UniProt:A0A6I8RU61

Gene Names

LOC100485124

Reference Genes

BioGPS Gene:100485124 LOC100485124

ENSEMBL:ENSXETG00000037680

KEGG:xtr:100485124 LOC100485124

Monarch:100485124 LOC100485124

NCBI Gene:100485124 LOC100485124

UCSC:A0A6I8RU61 LOC100485124

Reference Transcript

Other Identifiers

100485124

GO:0000977

GO:0000981

GO:0003677

GO:0005634

GO:0006355

GO:0006357

GO:0008270

GO:0046872

Participates

as a member of

Homologues of ZNF669 [nucleoplasm] (Xenopus tropicalis)

Inferred From

ZNF669 [nucleoplasm] (Homo sapiens)

Cross References

RefSeq

XP_012822838.1, XP_002938535.1, XP_004916258.1

ENSEMBL

ENSXETT00000073751, ENSXETG00000037680, ENSXETP00000084789

Xenbase

XB-GENE-29077627

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