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col9a3 [endoplasmic reticulum lumen]
Stable Identifier
R-XTR-2179201
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
endoplasmic reticulum lumen
Synonyms
3x4Hyp-3Hyp-GalHyl-COL9A3, B1H3F6
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Xenopus tropicalis)
Collagen formation (Xenopus tropicalis)
Collagen biosynthesis and modifying enzymes (Xenopus tropicalis)
Collagen chain trimerization (Xenopus tropicalis)
Association of procollagen type IX (Xenopus tropicalis)
C-linked procollagen type IX trimer [endoplasmic reticulum lumen] (Xenopus tropicalis)
col9a3 [endoplasmic reticulum lumen] (Xenopus tropicalis)
col9a3 [endoplasmic reticulum lumen] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:B1H3F6
Gene Names
col9a3
Reference Genes
BioGPS Gene:100145619 col9a3
ENSEMBL:ENSXETG00000045554
KEGG:xtr:100145619 col9a3
Monarch:100145619 col9a3
NCBI Gene:100145619 col9a3
UCSC:B1H3F6 col9a3
Reference Transcript
RefSeq:NM_001127025.1 col9a3
Other Identifiers
100145619
GO:0005198
GO:0005581
GO:0005594
GO:0005604
GO:0030020
GO:0030312
GO:0031012
Participates
as an input of
Association of procollagen type IX (Xenopus tropicalis)
as a component of
C-linked procollagen type IX trimer [endoplasmic reticulum lumen] (Xenopus tropicalis)
Other forms of this molecule
col9a3 [endoplasmic reticulum lumen]
col9a3 [endoplasmic reticulum lumen]
col9a3 [endoplasmic reticulum lumen]
col9a3 [endoplasmic reticulum lumen]
col9a3 [endoplasmic reticulum lumen]
col9a3 [endoplasmic reticulum lumen]
col9a3 [endoplasmic reticulum lumen]
col9a3 [endoplasmic reticulum lumen]
col9a3 [endoplasmic reticulum lumen]
col9a3 [endoplasmic reticulum lumen]
col9a3 [extracellular region]
col9a3 [extracellular region]
col9a3 [extracellular region]
col9a3 [extracellular region]
col9a3 [extracellular region]
col9a3 [extracellular region]
col9a3 [extracellular region]
col9a3 [extracellular region]
col9a3 [extracellular region]
col9a3 [extracellular region]
col9a3 [extracellular region]
col9a3 [extracellular region]
Inferred From
Alpha-3(IX) chains [endoplasmic reticulum lumen]
(Homo sapiens)
3x4Hyp-3Hyp-GalHyl-COL9A3 [endoplasmic reticulum lumen]
(Homo sapiens)
Modified Residues
Name
(2S,3S)-3-hydroxyproline at unknown position
PsiMod Name
(2S,3S)-3-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
O5-galactosyl-L-hydroxylysine at unknown position
PsiMod Name
O5-galactosyl-L-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.
Cross References
RefSeq
NP_001120497.1
ENSEMBL
ENSXETT00000123752
,
ENSXETG00000045554
,
ENSXETP00000105462
Xenbase
XB-GENE-997413
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