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Ghost homologue of Histone H3 [nucleoplasm]
Stable Identifier
R-XTR-212293
Type
Genes and Transcripts [GenomeEncodedEntity]
Species
Xenopus tropicalis
Compartment
nucleoplasm
Locations in the PathwayBrowser
Expand all
Cell-Cell communication (Xenopus tropicalis)
Cell junction organization (Xenopus tropicalis)
Cell-cell junction organization (Xenopus tropicalis)
Adherens junctions interactions (Xenopus tropicalis)
Regulation of Homotypic Cell-Cell Adhesion (Xenopus tropicalis)
Regulation of Expression and Function of Type I Classical Cadherins (Xenopus tropicalis)
Regulation of CDH1 Expression and Function (Xenopus tropicalis)
Regulation of CDH1 Gene Transcription (Xenopus tropicalis)
Negative Regulation of CDH1 Gene Transcription (Xenopus tropicalis)
PRC2 (EZH2) core complex methylates nucleosomes at CDH1 gene promoter (Xenopus tropicalis)
PRC2 (EZH2) Core:Nucleosome:CDH1 gene [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Cellular responses to stimuli (Xenopus tropicalis)
Cellular responses to stress (Xenopus tropicalis)
Cellular Senescence (Xenopus tropicalis)
Oxidative Stress Induced Senescence (Xenopus tropicalis)
KDM6B demethylates H3K27me3 on p16INK4A promoter (Xenopus tropicalis)
CDKN2A Gene:Nucleosome [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
PRC2-EZH2 trimethylates nucleosomes associated with CDKN2A promoter (Xenopus tropicalis)
CDKN2A Gene:Nucleosome [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Senescence-Associated Secretory Phenotype (SASP) (Xenopus tropicalis)
EHMT1:EHMT2 methylates IL6 promoter (Xenopus tropicalis)
IL6 gene:Nucleosome [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
EHMT1:EHMT2 methylates IL8 promoter (Xenopus tropicalis)
IL8 gene:Nucleosome [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Chromatin organization (Xenopus tropicalis)
ATP-dependent chromatin remodelers (Xenopus tropicalis)
CHD chromatin remodelers (Xenopus tropicalis)
CHD3, CHD4, CHD5 subfamily (Xenopus tropicalis)
NuRD complex assembly (Xenopus tropicalis)
Interaction of NuRD complexes with transcription factors (Xenopus tropicalis)
NuRD deacetylates telomeric nucleosomes (Xenopus tropicalis)
NR2C2,NR2F2:ZNF827:NuRD:H4K5,H4K8 Ac telomeric chromatin [nucleoplasm] (Xenopus tropicalis)
Chromatin (H4K5ac, H4K8ac) [nucleoplasm] (Xenopus tropicalis)
Nucleosome (H4K5ac, H4K8ac) [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
NR2C2,NR2F2:ZNF827:NuRD:telomeric chromatin [nucleoplasm] (Xenopus tropicalis)
Chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
ZNF827 and NR2C2,NR2F2 recruit NuRD to telomeric chromatin (Xenopus tropicalis)
Chromatin (H4K5ac, H4K8ac) [nucleoplasm] (Xenopus tropicalis)
Nucleosome (H4K5ac, H4K8ac) [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
NR2C2,NR2F2:ZNF827:NuRD:H4K5,H4K8 Ac telomeric chromatin [nucleoplasm] (Xenopus tropicalis)
Chromatin (H4K5ac, H4K8ac) [nucleoplasm] (Xenopus tropicalis)
Nucleosome (H4K5ac, H4K8ac) [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
CHD6, CHD7, CHD8, CHD9 subfamily (Xenopus tropicalis)
CHD6-9-dependent ATP hydrolysis (Xenopus tropicalis)
chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Chromatin modifying enzymes (Xenopus tropicalis)
HDACs deacetylate histones (Xenopus tropicalis)
HDAC10 deacetylates histone (Xenopus tropicalis)
Core histone octamer [nucleoplasm] (Xenopus tropicalis)
Histone H3:H4 tetramer [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
HDAC1:2-containing complex deacetylate histones (Xenopus tropicalis)
Core histone octamer [nucleoplasm] (Xenopus tropicalis)
Histone H3:H4 tetramer [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
HDAC3 containing complexes deacetylate histone (Xenopus tropicalis)
Core histone octamer [nucleoplasm] (Xenopus tropicalis)
Histone H3:H4 tetramer [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
HDAC8 deacetylates histones (Xenopus tropicalis)
Core histone octamer [nucleoplasm] (Xenopus tropicalis)
Histone H3:H4 tetramer [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
DNA Replication (Xenopus tropicalis)
DNA Replication Pre-Initiation (Xenopus tropicalis)
Assembly of the pre-replicative complex (Xenopus tropicalis)
Assembly of the ORC complex at the origin of replication (Xenopus tropicalis)
ORC1 binds to H4K20me2 (Xenopus tropicalis)
H4K20Me2-nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
ORC1:H4K20Me2-nucleosome [nucleoplasm] (Xenopus tropicalis)
H4K20Me2-nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Gene expression (Transcription) (Xenopus tropicalis)
Epigenetic regulation of gene expression (Xenopus tropicalis)
PRC2 methylates histones and DNA (Xenopus tropicalis)
DNMT1,3A,3B:PRC2 methylates cytosine and histone H3 (Xenopus tropicalis)
DNMT1,3A,3B:PRC2:Chromatin [nucleoplasm] (Xenopus tropicalis)
PRC2 Core:Chromatin [nucleoplasm] (Xenopus tropicalis)
Chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
PRC2 recruits DNA methyltransferases (Xenopus tropicalis)
DNMT1,3A,3B:PRC2:Chromatin [nucleoplasm] (Xenopus tropicalis)
PRC2 Core:Chromatin [nucleoplasm] (Xenopus tropicalis)
Chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
PRC2 Core:Chromatin [nucleoplasm] (Xenopus tropicalis)
Chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
PRC2 trimethylates histone H3 at lysine-27 (Xenopus tropicalis)
EZHIP:PRC2:Chromatin [nucleoplasm] (Xenopus tropicalis)
PRC2:Chromatin [nucleoplasm] (Xenopus tropicalis)
Chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
PRC2:Chromatin [nucleoplasm] (Xenopus tropicalis)
Chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Polycomb Repressive Complex 2 (PRC2) Is recruited to chromatin (Xenopus tropicalis)
Chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
PRC2:Chromatin [nucleoplasm] (Xenopus tropicalis)
Chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Regulation of endogenous retroelements (Xenopus tropicalis)
Regulation of endogenous retroelements by KRAB-ZFP proteins (Xenopus tropicalis)
KRAB-ZFP binds retroelement DNA in chromatin (Xenopus tropicalis)
KRAB-ZFP:retroelement chromatin [nucleoplasm] (Xenopus tropicalis)
Retroelement chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Retroelement chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
SETDB1 in ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement trimethylates lysine-9 of histone H3 in nucleosomes (Xenopus tropicalis)
ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin [nucleoplasm] (Xenopus tropicalis)
KRAB-ZFP:retroelement chromatin [nucleoplasm] (Xenopus tropicalis)
Retroelement chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Regulation of endogenous retroelements by the Human Silencing Hub (HUSH) complex (Xenopus tropicalis)
SETDB1 in me3-K16-ATF7IP:SETDB1:MORC2:HUSH complex:L1 RNA trimethylates lysine-9 of histone H3 (H3K9me3) (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
SETDB1 in me3-K16-ATF7IP:SETDB1:MORC2:HUSH complex:L1HS,L1PA2,3 heterochromatin trimethylates lysine-9 of histone H3 in adjacent nucleosome (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Gene Silencing by RNA (Xenopus tropicalis)
Transcriptional regulation by small RNAs (Xenopus tropicalis)
AGO1,2:small RNA complexes interact with chromatin (Xenopus tropicalis)
AGO1,2:miRNA:chromatin:RNA pol II [nucleoplasm] (Xenopus tropicalis)
Chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
RNA Polymerase I Transcription (Xenopus tropicalis)
RNA Polymerase I Promoter Clearance (Xenopus tropicalis)
RNA Polymerase I Promoter Opening (Xenopus tropicalis)
UBF-1 Binds rDNA Promoter (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Immune System (Xenopus tropicalis)
Adaptive Immune System (Xenopus tropicalis)
Regulation of T cell activation by CD28 family (Xenopus tropicalis)
Co-inhibition by PD-1 (Xenopus tropicalis)
Regulation of PD-L1(CD274) expression (Xenopus tropicalis)
Regulation of PD-L1(CD274) transcription (Xenopus tropicalis)
MLL1,MLL3 complex binding to CD274 gene chromatin (Xenopus tropicalis)
CD274 gene chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
CD274 gene chromatin:MLL1,MLL3 complex [nucleoplasm] (Xenopus tropicalis)
CD274 gene chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Trimethylation of CD274 gene chromatin by MLL1/3 complex (Xenopus tropicalis)
CD274 gene chromatin:MLL1,MLL3 complex [nucleoplasm] (Xenopus tropicalis)
CD274 gene chromatin [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Trimethylation of CD274 gene promoter by EZH2 (Xenopus tropicalis)
PRC2(EZH2) Core:Nucleosome:CD274 gene promoter [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Signal Transduction (Xenopus tropicalis)
Signaling by Nuclear Receptors (Xenopus tropicalis)
ESR-mediated signaling (Xenopus tropicalis)
Estrogen-dependent gene expression (Xenopus tropicalis)
KDM4B demethylates H3K9me3 on estrogen-responsive target enhancers (Xenopus tropicalis)
KDM4B-regulated genes:nucleosome:ESR1:ESTG [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
NR5A2, ZNF217 and NCOA3 bind GREB1 promoter (Xenopus tropicalis)
GREB1 gene:nucleosome:ESR1:ESTG [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
GREB1 gene:nucleosome:ESR1:ESTG:ZNF217:NCOA3:NR5A2 [nucleoplasm] (Xenopus tropicalis)
GREB1 gene:nucleosome:ESR1:ESTG [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Signaling by WNT (Xenopus tropicalis)
TCF dependent signaling in response to WNT (Xenopus tropicalis)
Formation of the beta-catenin:TCF transactivating complex (Xenopus tropicalis)
MLL2 complex trimethylates H3K4 at the MYC gene (Xenopus tropicalis)
MYC gene: H2B K121ub nucleosome [nucleoplasm] (Xenopus tropicalis)
Nucleosome with H2BK121ub [nucleoplasm] (Xenopus tropicalis)
Ghost homologue of Histone H3 [nucleoplasm] (Xenopus tropicalis)
Participates
as a component of
Nucleosome (H4K5ac, H4K8ac) [nucleoplasm] (Xenopus tropicalis)
Histone H3:H4 tetramer [nucleoplasm] (Xenopus tropicalis)
Nucleosome with H2BK121ub [nucleoplasm] (Xenopus tropicalis)
H4K20Me2-nucleosome [nucleoplasm] (Xenopus tropicalis)
Nucleosome [nucleoplasm] (Xenopus tropicalis)
Inferred From
Histone H3 [nucleoplasm]
(Homo sapiens)
Histone H3 [nucleoplasm]
(Homo sapiens)
Histone H3 [nucleoplasm]
(Homo sapiens)
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