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omd [Golgi lumen]
Stable Identifier
R-XTR-2046255
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
Golgi lumen
Synonyms
Gal-glycan OMD, A0A6I8SFJ2
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Keratan sulfate/keratin metabolism (Xenopus tropicalis)
Keratan sulfate biosynthesis (Xenopus tropicalis)
B3GNT1,2,3,4,7 add GlcNAc to form Keratan-PG (Xenopus tropicalis)
Gal-glycan-protein [Golgi lumen] (Xenopus tropicalis)
omd [Golgi lumen] (Xenopus tropicalis)
B4GALTs transfer Gal to the N-glycan precursor (Xenopus tropicalis)
Gal-glycan-protein [Golgi lumen] (Xenopus tropicalis)
omd [Golgi lumen] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:A0A6I8SFJ2
Gene Names
omd
Reference Genes
BioGPS Gene:105947037 omd
ENSEMBL:ENSXETG00000040260
KEGG Gene (Xenopus tropicalis):105947037 omd
Monarch:105947037 omd
NCBI Gene:105947037 omd
Reference Transcript
RefSeq:XM_031901098.1 omd
RefSeq:XM_012961800.3 omd
RefSeq:XM_031901099.1 omd
RefSeq:XM_031901097.1 omd
Other Identifiers
105947037
GO:0005515
Participates
as a member of
Gal-glycan-protein [Golgi lumen] (Xenopus tropicalis)
Other forms of this molecule
omd [Golgi lumen]
omd [Golgi lumen]
omd [Golgi lumen]
omd [Golgi lumen]
omd [Golgi lumen]
omd [Golgi lumen]
omd [Golgi lumen]
omd [lysosomal lumen]
omd [lysosomal lumen]
omd [extracellular region]
Inferred From
Gal-glycan OMD [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
N4-(N-acetylamino)glucosyl-L-asparagine (ChEBI:63492) at unknown position
Modification
beta-D-GlcNAc-(1->2)-alpha-D-Man-(1->3)-[beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->2)-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAcl-(1->4)-beta-D-GlcNAc-yl group
PsiMod Name
N4-(N-acetylamino)glucosyl-L-asparagine
PsiMod Definition
A protein modification that effectively converts an L-asparagine residue to N4-(N-acetylaminoglucosyl)-L-asparagine.
Cross References
RefSeq
XP_031756959.1
,
XP_031756957.1
,
XP_012817254.1
,
XP_031756958.1
Xenbase
XB-GENE-960655
Ensembl
ENSXETG00000040260
,
ENSXETT00000079768
,
ENSXETP00000092057
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