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fmod [Golgi lumen]
Stable Identifier
R-XTR-2046193
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
Golgi lumen
Synonyms
Gal-glycan FMOD, F6RIJ3
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Keratan sulfate/keratin metabolism (Xenopus tropicalis)
Keratan sulfate biosynthesis (Xenopus tropicalis)
B3GNT1,2,3,4,7 add GlcNAc to form Keratan-PG (Xenopus tropicalis)
Gal-glycan-protein [Golgi lumen] (Xenopus tropicalis)
fmod [Golgi lumen] (Xenopus tropicalis)
B4GALTs transfer Gal to the N-glycan precursor (Xenopus tropicalis)
Gal-glycan-protein [Golgi lumen] (Xenopus tropicalis)
fmod [Golgi lumen] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:F6RIJ3
Gene Names
fmod
Reference Genes
BioGPS Gene:100491938 fmod
ENSEMBL:ENSXETG00000011835
KEGG Gene (Xenopus tropicalis):100491938 fmod
Monarch:100491938 fmod
NCBI Gene:100491938 fmod
Reference Transcript
RefSeq:XM_018091533.2 fmod
Other Identifiers
100491938
GO:0005515
Participates
as a member of
Gal-glycan-protein [Golgi lumen] (Xenopus tropicalis)
Other forms of this molecule
fmod [plasma membrane]
fmod [Golgi lumen]
fmod [Golgi lumen]
fmod [Golgi lumen]
fmod [Golgi lumen]
fmod [Golgi lumen]
fmod [Golgi lumen]
fmod [Golgi lumen]
fmod [lysosomal lumen]
fmod [lysosomal lumen]
fmod [extracellular region]
Inferred From
Gal-glycan FMOD [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
N4-(N-acetylamino)glucosyl-L-asparagine (ChEBI:63492) at unknown position
Modification
beta-D-GlcNAc-(1->2)-alpha-D-Man-(1->3)-[beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->2)-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAcl-(1->4)-beta-D-GlcNAc-yl group
PsiMod Name
N4-(N-acetylamino)glucosyl-L-asparagine
PsiMod Definition
A protein modification that effectively converts an L-asparagine residue to N4-(N-acetylaminoglucosyl)-L-asparagine.
Cross References
RefSeq
XP_017947022.1
Xenbase
XB-GENE-982650
Ensembl
ENSXETT00000025875
,
ENSXETG00000011835
,
ENSXETP00000025875
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