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SKIV2L2 [nucleoplasm]
Stable Identifier
R-RNO-6791189
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
nucleoplasm
Synonyms
A0A8I5ZN47
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Rattus norvegicus)
Nuclear RNA decay (Rattus norvegicus)
MTREX (MTR4, SKIV2L2) in PAXT:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PABPN1 binds the RNA exosome (Rattus norvegicus)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
PAXT connection [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PAPBN1:RNA exosome [nucleoplasm] (Rattus norvegicus)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
PAXT connection [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
NEXT:ZC3H18:CBCA:m7GpppN-RNA binds the RNA exosome (Rattus norvegicus)
NEXT:ZC3H18:CBCA:m7GpppN-RNA [nucleoplasm] (Rattus norvegicus)
NEXT homodimer [nucleoplasm] (Rattus norvegicus)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
RNA exosome:NEXT:ZC3H18:CBCA:m7GpppN-RNA [nucleoplasm] (Rattus norvegicus)
NEXT homodimer [nucleoplasm] (Rattus norvegicus)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
NEXT:ZC3H4:CBCA:m7GpppN-RNA binds the RNA exosome (Rattus norvegicus)
NEXT:ZC3H4:CBCA:m7GpppN-RNA [nucleoplasm] (Rattus norvegicus)
NEXT homodimer [nucleoplasm] (Rattus norvegicus)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
RNA exosome:NEXT:ZC3H4:CBCA:m7GpppN-RNA [nucleoplasm] (Rattus norvegicus)
NEXT homodimer [nucleoplasm] (Rattus norvegicus)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
RNA exosome in PAXT:PAPOLG:TENT4A,B:ZC3H3:CBCA:polyadenylated m7GpppN-RNA:PABPN1 hydrolyzes RNA (Rattus norvegicus)
PAXT connection [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PAPBN1:RNA exosome [nucleoplasm] (Rattus norvegicus)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
PAXT connection [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
The NEXT complex and ZC3H18 bind CBCA:m7GpppN-RNA (Rattus norvegicus)
NEXT homodimer [nucleoplasm] (Rattus norvegicus)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
NEXT:ZC3H18:CBCA:m7GpppN-RNA [nucleoplasm] (Rattus norvegicus)
NEXT homodimer [nucleoplasm] (Rattus norvegicus)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
The NEXT complex binds ZC3H4:WDR82:CBCA:m7GpppN-RNA (Rattus norvegicus)
NEXT homodimer [nucleoplasm] (Rattus norvegicus)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
NEXT:ZC3H4:CBCA:m7GpppN-RNA [nucleoplasm] (Rattus norvegicus)
NEXT homodimer [nucleoplasm] (Rattus norvegicus)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
The PAXT connection (ZFC3H1:MTREX, ZFC3H1:MTR4), RBM26, RBM27, PAPOLG, YTHDC1, and YTHDC2 bind CBCA:polyadenylated m7GpppN-RNA:PABPN1 (Rattus norvegicus)
PAXT:PAPOLG:RBM26:RBM27:ZC3H3:YTHDC1:YTHDC2:CBCA:polyadenylated m7GpppN-RNA:PABPN1 [nucleoplasm] (Rattus norvegicus)
PAXT connection [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
The RNA exosome in RNA exosome:NEXT:ZC3H18:CBCA:m7GpppN-RNA hydrolyzes RNA (Rattus norvegicus)
NEXT homodimer [nucleoplasm] (Rattus norvegicus)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
RNA exosome:NEXT:ZC3H18:CBCA:m7GpppN-RNA [nucleoplasm] (Rattus norvegicus)
NEXT homodimer [nucleoplasm] (Rattus norvegicus)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
The RNA exosome in RNA exosome:NEXT:ZC3H4:WDR82:CBCA:capped RNA hydrolyzes capped RNA (Rattus norvegicus)
NEXT homodimer [nucleoplasm] (Rattus norvegicus)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
RNA exosome:NEXT:ZC3H4:CBCA:m7GpppN-RNA [nucleoplasm] (Rattus norvegicus)
NEXT homodimer [nucleoplasm] (Rattus norvegicus)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
Processing of Capped Intron-Containing Pre-mRNA (Rattus norvegicus)
mRNA Splicing (Rattus norvegicus)
mRNA Splicing - Major Pathway (Rattus norvegicus)
Formation of the Spliceosomal B* complex (Rattus norvegicus)
Spliceosomal B* complex [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
Spliceosomal Bact complex [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal C complex containing intron lariat (Rattus norvegicus)
Spliceosomal B* complex [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
Spliceosomal C complex [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal C* complex (Rattus norvegicus)
Spliceosomal C complex [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal P complex and exon ligation (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
rRNA processing (Rattus norvegicus)
rRNA processing in the nucleus and cytosol (Rattus norvegicus)
Major pathway of rRNA processing in the nucleolus and cytosol (Rattus norvegicus)
12S pre-rRNA is nucleolytically processed to yield 5.8S rRNA (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
21S pre-rRNA is nucleolytically processed at site E (site2a) to yield 18SE pre-rRNA (Rattus norvegicus)
EXOSC10:C1D:MPHOSPH6:SKIV2L2:Exosome [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
47S pre-rRNA is nucleolytically processed at A' (01,A1), site A0, and site 02 (site 6) to yield 45S pre-rRNA (Rattus norvegicus)
SKIV2L2 [nucleoplasm] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:A0A8I5ZN47
Reference Genes
ENSEMBL:ENSRNOG00000010125
UCSC:A0A8I5ZN47
Other Identifiers
10821340
1389810_at
17745247
365668
5756756
5780276
5790714
5791021
5821069
5837903
5911936
5913729
5999323
6041338
6060818
6167302
6168198
6170457
6209544
6209823
6230897
6270553
6271302
6281871
6410031
6436496
6458609
6461956
6473733
6474554
6650667
6715181
A_43_P17650
A_43_P17955
A_43_P18723
A_44_P189796
A_44_P485158
A_64_P118810
GE1190839
GO:0000166
GO:0000176
GO:0000178
GO:0000460
GO:0003676
GO:0003723
GO:0003724
GO:0003824
GO:0004386
GO:0005524
GO:0005634
GO:0005654
GO:0006364
GO:0006401
GO:0006974
GO:0008150
GO:0016787
GO:0031499
GO:0071013
GO:0140098
GO:0140657
ILMN_1357607
ILMN_2039959
PH_rn_0000552
Participates
as a component of
EXOSC10:C1D:MPHOSPH6:SKIV2L2:Exosome [nucleoplasm] (Rattus norvegicus)
PAXT connection [nucleoplasm] (Rattus norvegicus)
RBM7:ZCCHC8:SKIV2L2 [nucleoplasm] (Rattus norvegicus)
Spliceosomal Pre-B complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal B complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal Bact complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal B* complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal C complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
as an input of
The PAXT connection (ZFC3H1:MTREX, ZFC3H1:MTR4), RBM26, RBM27, PAPOLG, YTHDC1, and YTHDC2 bind CBCA:polyadenylated m7GpppN-RNA:PABPN1 (Rattus norvegicus)
as an output of
Formation of the Spliceosomal P complex and exon ligation (Rattus norvegicus)
This entity regulates
Positively
12S pre-rRNA is nucleolytically processed to yield 5.8S rRNA
(Rattus norvegicus)
21S pre-rRNA is nucleolytically processed at site E (site2a) to yield 18SE pre-rRNA
(Rattus norvegicus)
47S pre-rRNA is nucleolytically processed at A' (01,A1), site A0, and site 02 (site 6) to yield 45S pre-rRNA
(Rattus norvegicus)
Inferred From
SKIV2L2 [nucleoplasm]
(Homo sapiens)
Cross References
ENSEMBL
ENSRNOT00000106550
,
ENSRNOP00000077752
,
ENSRNOG00000010125
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