Reactome | LOC120095871 [nucleoplasm]

LOC120095871 [nucleoplasm]

Stable Identifier

R-RNO-2248869-7

Type

Protein [EntityWithAccessionedSequence]

Species

Rattus norvegicus

Compartment

nucleoplasm

Synonyms

ZNF669, A0A8I6GKU8

Locations in the PathwayBrowser

Expand all

Gene expression (Transcription) (Rattus norvegicus)

- Epigenetic regulation of gene expression (Rattus norvegicus)
  - Regulation of endogenous retroelements (Rattus norvegicus)
    - Regulation of endogenous retroelements by KRAB-ZFP proteins (Rattus norvegicus)
      - ATF7IP:SETDB1 binds SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin (Rattus norvegicus)
        
        ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZFP:retroelement chromatin [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZFPs that bind, repress retroelements [nucleoplasm] (Rattus norvegicus)
        
        Homologues of ZNF669 [nucleoplasm] (Rattus norvegicus)
        
        LOC120095871 [nucleoplasm] (Rattus norvegicus)
        
        SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZFP:retroelement chromatin [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZFPs that bind, repress retroelements [nucleoplasm] (Rattus norvegicus)
        
        Homologues of ZNF669 [nucleoplasm] (Rattus norvegicus)
        
        LOC120095871 [nucleoplasm] (Rattus norvegicus)
      - CBX5 (HP-1alpha) binds TRIM28 (KAP1) in SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin (Rattus norvegicus)
        
        CBX5:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement [nucleoplasm] (Rattus norvegicus)
        
        SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZFP:retroelement chromatin [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZFPs that bind, repress retroelements [nucleoplasm] (Rattus norvegicus)
        
        Homologues of ZNF669 [nucleoplasm] (Rattus norvegicus)
        
        LOC120095871 [nucleoplasm] (Rattus norvegicus)
        
        SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZFP:retroelement chromatin [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZFPs that bind, repress retroelements [nucleoplasm] (Rattus norvegicus)
        
        Homologues of ZNF669 [nucleoplasm] (Rattus norvegicus)
        
        LOC120095871 [nucleoplasm] (Rattus norvegicus)
      - KRAB-ZFP binds retroelement DNA in chromatin (Rattus norvegicus)
        
        KRAB-ZFP:retroelement chromatin [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZFPs that bind, repress retroelements [nucleoplasm] (Rattus norvegicus)
        
        Homologues of ZNF669 [nucleoplasm] (Rattus norvegicus)
        
        LOC120095871 [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZFPs that bind, repress retroelements [nucleoplasm] (Rattus norvegicus)
        
        Homologues of ZNF669 [nucleoplasm] (Rattus norvegicus)
        
        LOC120095871 [nucleoplasm] (Rattus norvegicus)
      - SETDB1 in ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement trimethylates lysine-9 of histone H3 in nucleosomes (Rattus norvegicus)
        
        ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZFP:retroelement chromatin [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZFPs that bind, repress retroelements [nucleoplasm] (Rattus norvegicus)
        
        Homologues of ZNF669 [nucleoplasm] (Rattus norvegicus)
        
        LOC120095871 [nucleoplasm] (Rattus norvegicus)
        
        ATF7IP:SETDB1:SUMO2-6K-TRIM28:KRAB-ZFP:retroelement chromatin with H3K9me3 [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZFP:retroelement chromatin with H3K9me3 [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZFPs that bind, repress retroelements [nucleoplasm] (Rattus norvegicus)
        
        Homologues of ZNF669 [nucleoplasm] (Rattus norvegicus)
        
        LOC120095871 [nucleoplasm] (Rattus norvegicus)
- RNA Polymerase II Transcription (Rattus norvegicus)
  - Generic Transcription Pathway (Rattus norvegicus)
    - KRAB-ZNF / KAP Interaction (Rattus norvegicus)
      - KRAB-ZNF / KAP Complex [nucleoplasm] (Rattus norvegicus)
        
        KRAB-ZNF [nucleoplasm] (Rattus norvegicus)
        
        Homologues of ZNF669 [nucleoplasm] (Rattus norvegicus)
        
        LOC120095871 [nucleoplasm] (Rattus norvegicus)
      - KRAB-ZNF [nucleoplasm] (Rattus norvegicus)
        
        Homologues of ZNF669 [nucleoplasm] (Rattus norvegicus)
        
        LOC120095871 [nucleoplasm] (Rattus norvegicus)

External Reference Information

External Reference

UniProt:A0A8I6GKU8

Gene Names

LOC120095871

Reference Genes

BioGPS Gene:120095871 LOC120095871

ENSEMBL:ENSRNOG00000068541

KEGG:rno:120095871 LOC120095871

Monarch:120095871 LOC120095871

NCBI Gene:120095871 LOC120095871

UCSC:A0A8I6GKU8 LOC120095871

Reference Transcript

RefSeq:XM_039089913.2 LOC120095871

Other Identifiers

10759488

10759846

120095871

1391744_at

5671759

5674500

5706600

5728914

5781467

5798516

5799581

5993807

6079165

6136115

6150730

6170754

6219780

6419982

6449711

6452231

6452695

6536836

A_43_P22634

GE1275638

GO:0006355

Participates

as a member of

Homologues of ZNF669 [nucleoplasm] (Rattus norvegicus)

Other forms of this molecule

LOC120095871 [nucleoplasm]

Inferred From

ZNF669 [nucleoplasm] (Homo sapiens)

Cross References

RefSeq

XP_038945841.1

ENSEMBL

ENSRNOT00000113560, ENSRNOP00000094614, ENSRNOG00000068541

RGD

41347965