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Sdc3 [Golgi lumen]
Stable Identifier
R-RNO-2064042
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
Golgi lumen
Synonyms
Gal-Gal-Xyl-SDC3, P33671
Locations in the PathwayBrowser
Expand all
Metabolism (Rattus norvegicus)
Metabolism of carbohydrates (Rattus norvegicus)
Glycosaminoglycan metabolism (Rattus norvegicus)
Chondroitin sulfate/dermatan sulfate metabolism (Rattus norvegicus)
A tetrasaccharide linker sequence is required for GAG synthesis (Rattus norvegicus)
B3GALT6 transfers Gal to the tetrasaccharide linker (Rattus norvegicus)
Gal-Gal-Xyl-proteins [Golgi lumen] (Rattus norvegicus)
Sdc3 [Golgi lumen] (Rattus norvegicus)
B3GAT dimers transfer GlcA to tetrasaccharide linker (Rattus norvegicus)
Gal-Gal-Xyl-proteins [Golgi lumen] (Rattus norvegicus)
Sdc3 [Golgi lumen] (Rattus norvegicus)
Heparan sulfate/heparin (HS-GAG) metabolism (Rattus norvegicus)
A tetrasaccharide linker sequence is required for GAG synthesis (Rattus norvegicus)
B3GALT6 transfers Gal to the tetrasaccharide linker (Rattus norvegicus)
Gal-Gal-Xyl-proteins [Golgi lumen] (Rattus norvegicus)
Sdc3 [Golgi lumen] (Rattus norvegicus)
B3GAT dimers transfer GlcA to tetrasaccharide linker (Rattus norvegicus)
Gal-Gal-Xyl-proteins [Golgi lumen] (Rattus norvegicus)
Sdc3 [Golgi lumen] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:P33671
Gene Names
Sdc3
Reference Genes
BioGPS Gene:116673 Sdc3
ENSEMBL:ENSRNOG00000011927
KEGG Gene (Rattus norvegicus):116673 Sdc3
Monarch:116673 Sdc3
NCBI Gene:116673 Sdc3
UCSC:P33671 Sdc3
Reference Transcript
RefSeq:NM_053893.3 Sdc3
Participates
as a member of
Gal-Gal-Xyl-proteins [Golgi lumen] (Rattus norvegicus)
Other forms of this molecule
Sdc3 [lysosomal lumen]
Sdc3 [lysosomal lumen]
Sdc3 [Golgi lumen]
Sdc3 [plasma membrane]
Sdc3 [plasma membrane]
Sdc3 [plasma membrane]
Sdc3 [plasma membrane]
Sdc3 [plasma membrane]
Sdc3 [plasma membrane]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Sdc3 [Golgi lumen]
Inferred From
Gal-Gal-Xyl-SDC3 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63503) at unknown position
Modification
beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_446345.3
PRO
P33671
RGD
621486
Interactors (1)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P34900 Sdc2
20
Syndecan-2 [plasma membrane]
(R-RNO-2750183)
phospho-Sdc2 [plasma membrane]
(R-RNO-4093306)
Sdc2 [lysosomal lumen]
(R-RNO-2090083)
Sdc2 [lysosomal lumen]
(R-RNO-2090064)
Sdc2 [Golgi lumen]
(R-RNO-2076607)
Sdc2 [Golgi lumen]
(R-RNO-2076603)
Sdc2 [plasma membrane]
(R-RNO-2076683)
Sdc2 [plasma membrane]
(R-RNO-2076661)
Sdc2 [plasma membrane]
(R-RNO-2076644)
Sdc2 [plasma membrane]
(R-RNO-2076643)
Sdc2 [plasma membrane]
(R-RNO-2076631)
Sdc2 [plasma membrane]
(R-RNO-2076665)
Sdc2 [endoplasmic reticulum lumen]
(R-RNO-8956741)
phospho-Sdc2 [endoplasmic reticulum lumen]
(R-RNO-8956945)
Sdc2 [Golgi lumen]
(R-RNO-2063988)
Sdc2 [Golgi lumen]
(R-RNO-2063997)
Sdc2 [Golgi lumen]
(R-RNO-2064132)
Sdc2 [Golgi lumen]
(R-RNO-2064109)
Sdc2 [Golgi lumen]
(R-RNO-2054101)
Sdc2 [Golgi lumen]
(R-RNO-2076361)
0.59
2
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