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Ctdp1 [nucleoplasm]
Stable Identifier
R-RNO-113416
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
nucleoplasm
Synonyms
CTDP1, A0A0G2K0J7
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Rattus norvegicus)
RNA Polymerase II Transcription (Rattus norvegicus)
Generic Transcription Pathway (Rattus norvegicus)
Transcriptional Regulation by TP53 (Rattus norvegicus)
TP53 Regulates Transcription of DNA Repair Genes (Rattus norvegicus)
CCNK:CDK12 binds RNA Pol II at DNA repair genes (Rattus norvegicus)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Rattus norvegicus)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Rattus norvegicus)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Rattus norvegicus)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
CDK12 phosphorylates RNA Pol II CTD at DNA repair genes (Rattus norvegicus)
CCNK:CDK12:CDK12-Phosphorylated Elongation Complex at DNA repair genes [nucleoplasm] (Rattus norvegicus)
CDK12-Phosphorylated Elongation Complex [nucleoplasm] (Rattus norvegicus)
CDK12-phosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
CCNK:CDK12:Elongation Complex at DNA Repair Genes [nucleoplasm] (Rattus norvegicus)
Elongation Complex at DNA Repair Genes [nucleoplasm] (Rattus norvegicus)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
RNA Polymerase II Pre-transcription Events (Rattus norvegicus)
2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing (Rattus norvegicus)
Paused processive elongation complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Abortive termination of early transcription elongation by DSIF:NELF (Rattus norvegicus)
DSIF:NELF:early elongation complex [nucleoplasm] (Rattus norvegicus)
RNA Pol II (hypophosphorylated) complex bound to DSIF protein [nucleoplasm] (Rattus norvegicus)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Abortive termination of elongation after arrest (Rattus norvegicus)
Aborted elongation complex after arrest [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Elongating transcript encounters a lesion in the template (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Resumption of elongation after recovery from pausing (Rattus norvegicus)
Paused processive elongation complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
TFIIS-mediated recovery of elongation from arrest (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
RNA Polymerase II Transcription Elongation (Rattus norvegicus)
Addition of nucleotides leads to transcript elongation (Rattus norvegicus)
Elongation complex [nucleoplasm] (Rattus norvegicus)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Formation of RNA Pol II elongation complex (Rattus norvegicus)
Hyperphosphorylation (Ser2) of RNA Pol II CTD by P-TEFb complex (Rattus norvegicus)
DSIF:NELF:early elongation complex [nucleoplasm] (Rattus norvegicus)
RNA Pol II (hypophosphorylated) complex bound to DSIF protein [nucleoplasm] (Rattus norvegicus)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Recruitment of elongation factors to form elongation complex (Rattus norvegicus)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Elongation complex [nucleoplasm] (Rattus norvegicus)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Formation of the Early Elongation Complex (Rattus norvegicus)
DSIF complex binds to RNA Pol II (hypophosphorylated) (Rattus norvegicus)
RNA Pol II (hypophosphorylated) complex bound to DSIF protein [nucleoplasm] (Rattus norvegicus)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Formation of DSIF:NELF:early elongation complex (Rattus norvegicus)
DSIF:NELF:early elongation complex [nucleoplasm] (Rattus norvegicus)
RNA Pol II (hypophosphorylated) complex bound to DSIF protein [nucleoplasm] (Rattus norvegicus)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
RNA Pol II (hypophosphorylated) complex bound to DSIF protein [nucleoplasm] (Rattus norvegicus)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Hypophosphorylation of RNA Pol II CTD by FCP1P protein (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Pol II elongation complex moves on the template as transcript elongates (Rattus norvegicus)
Elongation complex prior to separation [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Separation of elongating transcript from template (Rattus norvegicus)
Elongation complex prior to separation [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Rattus norvegicus)
Ctdp1 [nucleoplasm] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:A0A0G2K0J7
Gene Names
Ctdp1
Reference Genes
ENSEMBL:ENSRNOG00000061474
UCSC:A0A0G2K0J7 Ctdp1
Reference Transcript
RefSeq:XM_006254942.3 Ctdp1
Other Identifiers
10805401
1390535_at
17727278
291414
5678642
5916531
6016305
6101609
6118575
6227200
6241463
6263400
6285390
6378311
6461009
6629230
6652844
6654861
6709499
A_43_P20604
A_44_P144916
A_44_P853293
GE1146896
GO:0000278
GO:0000922
GO:0001096
GO:0003824
GO:0004721
GO:0005634
GO:0005654
GO:0005813
GO:0005815
GO:0005819
GO:0005856
GO:0008420
GO:0010458
GO:0016787
GO:0030496
GO:0030957
GO:0032991
GO:0043226
GO:0043231
GO:0043923
GO:0051233
GO:0140014
GO:0140096
ILMN_1362879
PH_rn_0009092
Participates
as an output of
Elongating transcript encounters a lesion in the template (Rattus norvegicus)
as a component of
Aborted elongation complex after arrest [nucleoplasm] (Rattus norvegicus)
Paused processive elongation complex [nucleoplasm] (Rattus norvegicus)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Rattus norvegicus)
Elongation complex prior to separation [nucleoplasm] (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Rattus norvegicus)
RNA Pol II (hypophosphorylated):capped pre-mRNA complex [nucleoplasm] (Rattus norvegicus)
CDK12-phosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Rattus norvegicus)
Hyperphosphorylated RNA Pol II at DNA repair genes [nucleoplasm] (Rattus norvegicus)
as an input of
Hypophosphorylation of RNA Pol II CTD by FCP1P protein (Rattus norvegicus)
Inferred From
CTDP1 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_006255004.1
ENSEMBL
ENSRNOT00000089122
,
ENSRNOP00000071476
RGD
1311755
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