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Rbm39 [nucleoplasm]
Stable Identifier
R-MMU-9770254
Type
Protein [EntityWithAccessionedSequence]
Species
Mus musculus
Compartment
nucleoplasm
Synonyms
RBM39, Q8VH51
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Mus musculus)
Processing of Capped Intron-Containing Pre-mRNA (Mus musculus)
mRNA 3'-end processing (Mus musculus)
mRNA Polyadenylation (Mus musculus)
CPA complex components dissociate from polyadenylated pre-mRNA (distal 3'UTR PAS) (Mus musculus)
Spliceosomal A complex (capped, methylated, polyadenylated pre-mRNA) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
CPA complex components dissociate from polyadenylated pre-mRNA (intronic PAS) (Mus musculus)
Spliceosomal A complex (capped, methylated, polyadenylated pre-mRNA) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
CPA complex components dissociate from polyadenylated pre-mRNA (proximal 3'UTR PAS) (Mus musculus)
Spliceosomal A complex (capped, methylated, polyadenylated pre-mRNA) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
Core CPA complex binds capped pre-mRNA (Mus musculus)
Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS (Mus musculus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS (Mus musculus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at intronic PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS (Mus musculus)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
PP1 dephosphorylates RNA Pol II (Mus musculus)
CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
RBBP6 activates CPSF complex (Mus musculus)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
Ub-K63-CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser2 dephosphorylated) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
Recruitment of other CPA components to pre-mRNA-bound CPA core (Mus musculus)
CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
mRNA Splicing (Mus musculus)
mRNA Splicing - Major Pathway (Mus musculus)
Formation of the Spliceosomal B complex (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
Spliceosomal Pre-B complex [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
Formation of the Spliceosomal E complex (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
Spliceosomal E complex [nucleoplasm] (Mus musculus)
Rbm39 [nucleoplasm] (Mus musculus)
External Reference Information
External Reference
UniProt:Q8VH51
Gene Names
Rbm39
Reference Genes
BioGPS Gene:170791 Rbm39
ENSEMBL:ENSMUSG00000027620
KEGG:mmu:170791 Rbm39
Monarch:170791 Rbm39
NCBI Gene:170791 Rbm39
UCSC:Q8VH51 Rbm39
Reference Transcript
RefSeq:XM_030248017.2 Rbm39
RefSeq:XM_030248031.2 Rbm39
RefSeq:XM_017315994.3 Rbm39
RefSeq:XM_036158991.1 Rbm39
RefSeq:XM_036158989.1 Rbm39
RefSeq:NM_001291115.1 Rbm39
RefSeq:NM_133242.3 Rbm39
RefSeq:NM_001291114.1 Rbm39
RefSeq:XM_036158990.1 Rbm39
RefSeq:XM_036158988.1 Rbm39
RefSeq:XM_030248020.2 Rbm39
RefSeq:NM_001362769.1 Rbm39
RefSeq:XM_011239327.4 Rbm39
RefSeq:XM_017316005.3 Rbm39
RefSeq:XM_030248011.2 Rbm39
RefSeq:XM_030248028.2 Rbm39
RefSeq:XM_030248021.2 Rbm39
Other Identifiers
10489018
1426671_a_at
1438397_a_at
1438398_at
1438420_at
1439316_at
1442744_at
1442745_x_at
1446147_at
1446148_x_at
170791
17393501
4318336
4322711
4349010
4397982
4402637
4436009
4457374
4507833
4520161
4603839
4605749
4625264
4654188
4655364
4714757
4748332
4776299
4788613
4834438
4867134
4883531
4907404
4915822
4923019
4986207
5010124
5025258
5036827
5077469
5081815
5088631
5127400
5128947
5162293
5219100
5224849
5237596
5240436
5241837
5305117
5317844
5358382
5361671
5369595
5400373
5408030
5438904
5459729
5470551
5485351
5512650
5583963
5599205
93267_at
94689_at
A_52_P232346
A_52_P275324
A_52_P444915
A_55_P2000823
A_55_P2030135
A_55_P2499268
A_55_P2722085
A_55_P2727419
A_55_P2739760
A_65_P12346
GE102214
GO:0003676
GO:0003723
GO:0005515
GO:0005634
GO:0005654
GO:0005856
GO:0006397
GO:0008380
GO:0010468
GO:0015630
GO:0016071
GO:0016607
GO:0032991
GO:0034451
GO:0048024
GO:0050733
GO:0051252
GO:1990446
ILMN_1240014
ILMN_2422755
ILMN_2646456
aa673554_s_at
c80656_rc_at
mMC020764
mMC021372
Participates
as a component of
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Mus musculus)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Mus musculus)
Spliceosomal E complex [nucleoplasm] (Mus musculus)
Spliceosomal A complex (capped, methylated, polyadenylated pre-mRNA) [nucleoplasm] (Mus musculus)
Spliceosomal Pre-B complex [nucleoplasm] (Mus musculus)
as an output of
Formation of the Spliceosomal B complex (Mus musculus)
as an input of
Formation of the Spliceosomal E complex (Mus musculus)
Other forms of this molecule
Rbm39 [nuclear envelope]
Rbm39 [plasma membrane]
Rbm39 [endoplasmic reticulum membrane]
Inferred From
RBM39 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_001278043.1
,
NP_001278044.1
,
NP_573505.2
,
XP_030103891.1
,
NP_001349698.1
,
XP_030103881.1
,
XP_030103871.1
,
XP_011237629.1
,
XP_036014884.1
,
XP_030103880.1
,
XP_017171494.1
,
XP_017171483.1
,
XP_036014883.1
,
XP_036014882.1
,
XP_036014881.1
,
XP_030103877.1
,
XP_030103888.1
ENSEMBL
ENSMUST00000029149
,
ENSMUSP00000105216
,
ENSMUST00000109587
,
ENSMUSP00000119298
,
ENSMUSG00000027620
,
ENSMUST00000146297
,
ENSMUSP00000029149
PRO
Q8VH51
MGI
2157953
GlyGen
Q8VH51
PDB
2LQ5
,
3S6E
,
4J5O
,
5CXT
,
4RU2
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