Reactome | Col6a6 [extracellular region]

Col6a6 [extracellular region]

Stable Identifier

R-MMU-2470098

Type

Protein [EntityWithAccessionedSequence]

Species

Mus musculus

Compartment

extracellular region

Synonyms

3Hyp-4Hyp-GalHyl-COL6A6(20-?), Q8C6K9

Locations in the PathwayBrowser

Expand all

Extracellular matrix organization (Mus musculus)

- Degradation of the extracellular matrix (Mus musculus)
  - Collagen degradation (Mus musculus)
    - Collagen type VI degradation by MMP2,9,11 (Mus musculus)
      - Cleaved collagen type VI fibril [extracellular region] (Mus musculus)
        
        Cleaved tropocollagen type VI tetramer [extracellular region] (Mus musculus)
        
        Cleaved tropocollagen type VI dimer [extracellular region] (Mus musculus)
        
        Cleaved tropocollagen type VI [extracellular region] (Mus musculus)
        
        Cleaved collagen alpha 3-6(VI) [extracellular region] (Mus musculus)
        
        Col6a6 [extracellular region] (Mus musculus)

External Reference Information

External Reference

UniProt:Q8C6K9

Gene Names

Col6a6

Reference Genes

BioGPS Gene:245026 Col6a6

ENSEMBL:ENSMUSG00000043719

ENSEMBL:ENSMUSG00000043719.15 Col6a6

KEGG Gene (Mus musculus):245026 Col6a6

Monarch:245026 Col6a6

NCBI Gene:245026 Col6a6

UCSC:Q8C6K9 Col6a6

Reference Transcript

Other Identifiers

10596383

10596394

116777_at

17530503

245026

4336279

4346193

4406269

4406385

4485235

4504579

4530029

4562934

4578989

4580200

4601153

4713033

4734648

4756390

4767458

4768990

4771813

4826932

4845328

4847240

4939616

4955883

4963212

5050944

5068440

5074964

5088657

5132136

5183412

5196635

5205463

5213877

5215773

5282115

5283621

5427449

5555280

5594296

5610894

A_51_P105847

A_55_P2092164

GE1395467

GE1451136

GE1534446

GO:0005198

GO:0005576

GO:0005581

GO:0007155

GO:0030020

GO:0030312

GO:0031012

GO:0062023

ILMN_1230642

ILMN_2723173

mMC013273

Participates

as a member of

Cleaved collagen alpha 3-6(VI) [extracellular region] (Mus musculus)

Other forms of this molecule

Col6a6 [endoplasmic reticulum lumen]

Col6a6 [extracellular region]

Inferred From

Cleaved collagen alpha-6(VI) chains [extracellular region] (Homo sapiens)

3Hyp-4Hyp-GalHyl-COL6A6(20-?) [extracellular region] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

O5-galactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-galactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.

Cross References

RefSeq

NP_766515.2, NP_001096077.1

Ensembl

ENSMUSG00000043719, ENSMUSP00000096040, ENSMUST00000060896, ENSMUSP00000060840, ENSMUST00000098441

PRO

Q8C6K9

MGI

2444259