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5Hyl-COL21A1 [extracellular region]
Stable Identifier
R-HSA-2192920
Type
Protein [EntityWithAccessionedSequence]
Species
Homo sapiens
Compartment
extracellular region
Synonyms
5-hydroxylysyl-collagen alpha-1(XXI) chain, Collagen alpha-1(XXI) chain, COL21A1, COLA1_HUMAN
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Homo sapiens)
Collagen formation (Homo sapiens)
Collagen biosynthesis and modifying enzymes (Homo sapiens)
Secretion of collagens (Homo sapiens)
Collagens and tropocollagens [extracellular region] (Homo sapiens)
Non-fibrillar collagens [extracellular region] (Homo sapiens)
Collagen type XXI [extracellular region] (Homo sapiens)
Collagen alpha-1(XXI) chains [extracellular region] (Homo sapiens)
5Hyl-COL21A1 [extracellular region] (Homo sapiens)
External Reference Information
External Reference
UniProt:Q96P44 COL21A1
Gene Names
COL21A1, COL1AL, FP633
Chain
signal peptide:1-22, chain:23-957
Reference Genes
BioGPS Gene:81578 COL21A1
COSMIC (genes):COL21A1 COL21A1
CTD Gene:81578 COL21A1
dbSNP Gene:81578 COL21A1
ENSEMBL:ENSG00000124749 COL21A1
HGNC:17025 COL21A1
Monarch:81578 COL21A1
NCBI Gene:81578 COL21A1
OMIM:610002 COL21A1
UCSC:Q96P44 COL21A1
Reference Transcript
RefSeq:NM_001318751.1 COL21A1
RefSeq:XM_011514927.1 COL21A1
RefSeq:XM_011514925.2 COL21A1
RefSeq:NM_001318753.1 COL21A1
RefSeq:NM_001318754.1 COL21A1
RefSeq:XM_011514924.2 COL21A1
RefSeq:NM_030820.3 COL21A1
RefSeq:XM_011514926.1 COL21A1
RefSeq:NM_001318752.1 COL21A1
Other Identifiers
11724080_x_at
11748714_a_at
11755816_a_at
17020268
208096_PM_s_at
208096_s_at
2958233
2958234
2958235
2958236
2958237
2958238
2958239
2958240
2958241
2958242
2958243
2958244
2958245
2958246
2958247
2958248
2958249
2958250
2958251
2958253
2958254
2958255
2958256
2958257
2958261
2958262
2958265
2958269
2958270
2958271
2958272
2958273
2958274
2958275
2958277
2958278
2958279
2958281
2958282
2958283
2958284
2958285
2958286
2958288
2958290
2958291
2958295
2958303
35237_at
51272_at
8127201
81578
GE56108
GO:0005198
GO:0005576
GO:0005581
GO:0005737
GO:0005788
GO:0005829
GO:0030020
GO:0030312
GO:0031012
GO:0062023
HMNXSV003030957
ILMN_1792736
PH_hs_0024768
TC06001826.hg
g13540617_3p_s_at
Participates
as a member of
Collagen alpha-1(XXI) chains [extracellular region] (Homo sapiens)
Other forms of this molecule
5Hyl-COL21A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-5Hyl-COL21A1 [endoplasmic reticulum lumen]
3x4Hyp-5Hyl-COL21A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-COL21A1 [endoplasmic reticulum lumen]
3x4Hyp-COL21A1 [endoplasmic reticulum lumen]
COL21A1 [endoplasmic reticulum lumen]
3x4Hyp-GalHyl-COL21A1 [endoplasmic reticulum lumen]
GlcGalHyl-COL21A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GlcGalHyl-COL21A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-GalHyl-COL21A1 [endoplasmic reticulum lumen]
3x4Hyp-GlcGalHyl-COL21A1 [endoplasmic reticulum lumen]
GalHyl-COL21A1 [endoplasmic reticulum lumen]
3x4Hyp-3Hyp-5Hyl-COL21A1 [extracellular region]
3x4Hyp-3Hyp-GalHyl-COL21A1 [extracellular region]
3x4Hyp-COL21A1 [extracellular region]
3x4Hyp-5Hyl-COL21A1 [extracellular region]
3x4Hyp-GalHyl-COL21A1 [extracellular region]
COL21A1 [extracellular region]
3x4Hyp-3Hyp-GlcGalHyl-COL21A1 [extracellular region]
3x4Hyp-3Hyp-COL21A1 [extracellular region]
GlcGalHyl-COL21A1 [extracellular region]
3x4Hyp-GlcGalHyl-COL21A1 [extracellular region]
Inferred To
COL21A1 [extracellular region]
(Canis familiaris)
COL21A1 [extracellular region]
(Sus scrofa)
5Hyl-COL21A1 [extracellular region]
(Bos taurus)
5Hyl-COL21A1 [extracellular region]
(Gallus gallus)
Modified Residues
Name
(2S,5R)-5-hydroxylysine at unknown position
PsiMod Name
(2S,5R)-5-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.
Cross References
OpenTargets
ENSG00000124749
ENSEMBL
ENST00000244728
,
ENST00000370819
,
ENSP00000244728
,
ENSP00000359855
HPA
ENSG00000124749-COL21A1
PRO
Q96P44
Pharos - Targets
Q96P44
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