Reactome | COLGALT2 [endoplasmic reticulum lumen]

COLGALT2 [endoplasmic reticulum lumen]

Stable Identifier

R-HSA-1981122

Type

Protein [EntityWithAccessionedSequence]

Species

Homo sapiens

Compartment

endoplasmic reticulum lumen

Synonyms

Procollagen galactosyltransferase 2, GLT25D2, GT252_HUMAN

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:Q8IYK4 COLGALT2

Gene Names

COLGALT2, C1orf17, GLT25D2, KIAA0584

Chain

signal peptide:1-27, chain:28-626

Reference Genes

BioGPS Gene:23127 COLGALT2

COSMIC (genes):COLGALT2 COLGALT2

CTD Gene:23127 COLGALT2

dbSNP Gene:23127 COLGALT2

ENSEMBL:ENSG00000198756 COLGALT2

HGNC:16790 COLGALT2

KEGG:hsa:23127 COLGALT2

Monarch:23127 COLGALT2

NCBI Gene:23127 COLGALT2

OMIM:617533 COLGALT2

UCSC:Q8IYK4 COLGALT2

Reference Transcript

Other Identifiers

11724166_a_at

11724167_s_at

11724168_a_at

11754253_a_at

11763295_at

16697138

209883_PM_at

209883_at

23127

237382_PM_at

237382_at

2447541

2447542

2447548

2447549

2447550

2447551

2447552

2447553

2447554

2447557

2447567

2447569

2447570

2447571

2447573

2447574

2447575

2447576

2447577

2447578

2447579

2447580

2447587

2447590

2447591

2447593

2447609

2447610

2447611

39550_at

45457_at

7922807

A_24_P62505

A_33_P3252524

GE53293

GO:0003824

GO:0005515

GO:0005783

GO:0005788

GO:0016740

GO:0016757

GO:0030198

GO:0030199

GO:0043226

GO:0050211

GO:0140096

HMNXSV003057840

Hs.26835.0.A1_3p_at

ILMN_1736742

PH_hs_0024441

TC01003621.hg

TC01005993.hg

g12620187_3p_at

Participates

as a member of

COLGALT1,COLGALT2 [endoplasmic reticulum lumen] (Homo sapiens)

Inferred To

colgalt2 [endoplasmic reticulum lumen] (Xenopus tropicalis)

COLGALT2 [endoplasmic reticulum lumen] (Bos taurus)

COLGALT2 [endoplasmic reticulum lumen] (Caenorhabditis elegans)

COLGALT2 [endoplasmic reticulum lumen] (Canis familiaris)

COLGALT2 [endoplasmic reticulum lumen] (Drosophila melanogaster)

COLGALT2 [endoplasmic reticulum lumen] (Gallus gallus)

COLGALT2 [endoplasmic reticulum lumen] (Sus scrofa)

Colgalt2 [endoplasmic reticulum lumen] (Mus musculus)

Colgalt2 [endoplasmic reticulum lumen] (Rattus norvegicus)

colgalt2b [endoplasmic reticulum lumen] (Danio rerio)

Cross References

ENSEMBL

ENST00000361927, ENSP00000354960, ENSG00000198756

OpenTargets

ENSG00000198756

IntEnz

2.4.1.50

GeneCards

COLGALT2

HPA

ENSG00000198756-COLGALT2

PRO

Q8IYK4

Pharos - Targets

Q8IYK4

HMDB Protein

HMDBP11758

Interactors (3)

Accession	#Entities	Entities	Confidence Score	Evidence (IntAct)
UniProt:Q9BT09 CNPY3	1	CNPY3 [endoplasmic reticulum lumen] (R-HSA-1678932)	0.527	2
UniProt:P02452 COL1A1	20	3x4Hyp-3Hyp-GlcGalHyl-COL1A1(23-1464) [endoplasmic reticulum lumen] (R-HSA-2023648) 3x4Hyp-GlcGalHyl-COL1A1(23-1464) [endoplasmic reticulum lumen] (R-HSA-2023667) GlcGalHyl-COL1A1(23-1464) [endoplasmic reticulum lumen] (R-HSA-2023604) GalHyl-COL1A1(23-1464) [endoplasmic reticulum lumen] (R-HSA-2022999) 3x4Hyp-3Hyp-GalHyl-COL1A1(23-1464) [endoplasmic reticulum lumen] (R-HSA-2023559) 3x4Hyp-GalHyl-COL1A1(23-1464) [endoplasmic reticulum lumen] (R-HSA-2023582) COL1A1(23-1464) [endoplasmic reticulum lumen] (R-HSA-1650777) 3x4Hyp-COL1A1(23-1464) [endoplasmic reticulum lumen] (R-HSA-1985659) 3x4Hyp-3Hyp-COL1A1(23-1464) [endoplasmic reticulum lumen] (R-HSA-2022446) 3x4Hyp-5Hyl-COL1A1(23-1464) [endoplasmic reticulum lumen] (R-HSA-2022951) 3x4Hyp-3Hyp-5Hyl-COL1A1(23-1464) [endoplasmic reticulum lumen] (R-HSA-2022954) 5Hyl-COL1A1(23-1464) [endoplasmic reticulum lumen] (R-HSA-1985663) Lysyl-pyrrolyl 5-hydroxylysyl collagen alpha-1(I) chain [extracellular region] (R-HSA-2396137) Lysyl-pyrrolyl 3,4-Hyp 5-Hyl collagen alpha-1(I) chain [extracellular region] (R-HSA-2396440) Lysyl-pyrrolyl 4-Hyp 5-Hyl collagen alpha-1(I) chain [extracellular region] (R-HSA-2396471) Lysyl-pyridinolyl 5-hydroxylysyl collagen alpha-1(I) chain [extracellular region] (R-HSA-2396464) Lysyl-pyridinolyl 4-Hyp 5-Hyl collagen alpha-1(I) chain [extracellular region] (R-HSA-2396068) Lysyl-pyridinolyl 3,4-Hyp 5-Hyl collagen alpha-1(I) chain [extracellular region] (R-HSA-2396388) Dehydrolysinonorlysyl 4-hydroxyprolyl collagen alpha-1(I) chain [extracellular region] (R-HSA-2396315) Dehydrolysinonorlysyl 4-Hyp 5-Gal-Hyl collagen alpha-1(I) chain [extracellular region] (R-HSA-2396441)	0.527	2
UniProt:Q9H267 VPS33B	3	VPS33B [cytosol] (R-HSA-9636417) p-Y133-VPS33B [cytosol] (R-HSA-9636380) VPS33B [endosome membrane] (R-HSA-2197801)	0.527	3

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