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HMGB1 [extracellular region]
Stable Identifier
R-GGA-6797422
Type
Protein [EntityWithAccessionedSequence]
Species
Gallus gallus
Compartment
extracellular region
Synonyms
HC23,45-HMGB1, Q9YH06
Locations in the PathwayBrowser
Expand all
Immune System (Gallus gallus)
Innate Immune System (Gallus gallus)
Toll-like Receptor Cascades (Gallus gallus)
Regulation of TLR by endogenous ligand (Gallus gallus)
HMGB1 binds LPS (Gallus gallus)
HC23,45-HMGB1:LPS [extracellular region] (Gallus gallus)
HMGB1 [extracellular region] (Gallus gallus)
HMGB1 [extracellular region] (Gallus gallus)
HMGB1 binds LTP (Gallus gallus)
HC23,45-HMGB1:LTA [extracellular region] (Gallus gallus)
HMGB1 [extracellular region] (Gallus gallus)
HMGB1 [extracellular region] (Gallus gallus)
HMGB1 binds TLR4:LY96 (Gallus gallus)
HC23,45-HMGB1:TLR4:LY96 [plasma membrane] (Gallus gallus)
HMGB1 [extracellular region] (Gallus gallus)
HMGB1 [extracellular region] (Gallus gallus)
HMGB1 release from cells (Gallus gallus)
HMGB1 [extracellular region] (Gallus gallus)
Programmed Cell Death (Gallus gallus)
Regulated Necrosis (Gallus gallus)
Pyroptosis (Gallus gallus)
HMGB1 release from cells (Gallus gallus)
HMGB1 [extracellular region] (Gallus gallus)
External Reference Information
External Reference
UniProt:Q9YH06
Gene Names
HMGB1
Reference Genes
BioGPS Gene:395724 HMGB1
ENSEMBL:ENSGALG00010007011
KEGG:gga:395724 HMGB1
Monarch:395724 HMGB1
NCBI Gene:395724 HMGB1
UCSC:Q9YH06 HMGB1
Reference Transcript
RefSeq:XM_046906700.1 HMGB1
RefSeq:XM_046906701.1 HMGB1
RefSeq:NM_204902.2 HMGB1
RefSeq:XM_015277667.4 HMGB1
RefSeq:XM_040653291.2 HMGB1
RefSeq:XM_046906696.1 HMGB1
RefSeq:XM_046906698.1 HMGB1
RefSeq:XM_015277670.3 HMGB1
RefSeq:XM_046906699.1 HMGB1
RefSeq:XM_046907210.1 HMGB1
RefSeq:XM_040653347.2 HMGB1
Other Identifiers
395724
GO:0000400
GO:0000405
GO:0001654
GO:0001773
GO:0001935
GO:0002270
GO:0002281
GO:0002318
GO:0002376
GO:0002643
GO:0002840
GO:0003677
GO:0003690
GO:0003723
GO:0003725
GO:0003727
GO:0005125
GO:0005576
GO:0005615
GO:0005634
GO:0005694
GO:0005737
GO:0005768
GO:0005769
GO:0005980
GO:0006281
GO:0006284
GO:0006325
GO:0006338
GO:0006351
GO:0006355
GO:0006366
GO:0006954
GO:0007165
GO:0008301
GO:0010508
GO:0010858
GO:0030099
GO:0030154
GO:0030295
GO:0030324
GO:0032392
GO:0032727
GO:0032728
GO:0032731
GO:0032755
GO:0032760
GO:0034137
GO:0034145
GO:0035767
GO:0043005
GO:0044378
GO:0045087
GO:0045089
GO:0045639
GO:0045819
GO:0045944
GO:0048018
GO:0048856
GO:0048870
GO:0051384
GO:0070374
GO:0071222
GO:0071639
GO:0090303
GO:0097100
GO:0098542
GO:0098761
GO:0098772
GO:1901224
GO:1903672
GO:1905455
GO:2000819
GT_A_87_P035635
GT_A_87_P111233
Gga.10817.1.S1_at
Gga.4638.1.S1_at
Participates
as an input of
HMGB1 binds LTP (Gallus gallus)
HMGB1 binds LPS (Gallus gallus)
HMGB1 binds TLR4:LY96 (Gallus gallus)
as a component of
HC23,45-HMGB1:LTA [extracellular region] (Gallus gallus)
HC23,45-HMGB1:LPS [extracellular region] (Gallus gallus)
HC23,45-HMGB1:TLR4:LY96 [plasma membrane] (Gallus gallus)
as an output of
HMGB1 release from cells (Gallus gallus)
Other forms of this molecule
HMGB1 [secretory granule lumen]
HMGB1 [ficolin-1-rich granule lumen]
HMGB1 [extracellular region]
HMGB1 [nucleoplasm]
Inferred From
HC23,45-HMGB1 [extracellular region]
(Homo sapiens)
Modified Residues
Name
Intra-chain Crosslink via L-cystine (cross-link) at 23 and 45 (in Homo sapiens)
Coordinate
23
PsiMod Name
L-cystine (cross-link)
PsiMod Definition
A protein modification that effectively cross-links two L-cysteine residues to form L-cystine.
Cross References
RefSeq
XP_046762656.1
,
XP_046763166.1
,
XP_015133156.1
,
XP_046762655.1
,
XP_046762654.1
,
XP_046762652.1
,
XP_015133153.1
,
XP_040509225.1
,
NP_990233.1
,
XP_046762657.1
,
XP_040509281.1
ENSEMBL
ENSGALG00010007011
,
ENSGALT00010016643
,
ENSGALP00010009408
PRO
Q9YH06
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