Reactome | TOPBP1 [nucleoplasm]

TOPBP1 [nucleoplasm]

Stable Identifier

R-GGA-5684878

Type

Protein [EntityWithAccessionedSequence]

Species

Gallus gallus

Compartment

nucleoplasm

Synonyms

A0A1D5P3M9

Locations in the PathwayBrowser

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DNA Repair (Gallus gallus)

- DNA Double-Strand Break Repair (Gallus gallus)
  - Homology Directed Repair (Gallus gallus)
    - HDR through Homologous Recombination (HRR) or Single Strand Annealing (SSA) (Gallus gallus)
      - HDR through Homologous Recombination (HRR) (Gallus gallus)
        
        Homologous DNA Pairing and Strand Exchange (Gallus gallus)
        
        Presynaptic phase of homologous DNA pairing and strand exchange (Gallus gallus)
        
        RAD51 binds BRCA2 at resected DNA DSBs (Gallus gallus)
        
        ATR:ATRIP:p-RPA:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        TOPBP1 [nucleoplasm] (Gallus gallus)
        
        TOPBP1 [nucleoplasm] (Gallus gallus)
      - HDR through Single Strand Annealing (SSA) (Gallus gallus)
        
        Association of RAD51 with RAD52:DNA double-strand break ends (Gallus gallus)
        
        RAD51:p-Y104-RAD52:p-RPA:ATR:ATRIP:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        p-Y104-RAD52:p-RPA:ATR:ATRIP:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        ATR:ATRIP:p-RPA:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        TOPBP1 [nucleoplasm] (Gallus gallus)
        
        p-Y104-RAD52:p-RPA:ATR:ATRIP:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        ATR:ATRIP:p-RPA:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        TOPBP1 [nucleoplasm] (Gallus gallus)
        
        Association of RAD52 with the RPA complex at resected DNA DSBs (Gallus gallus)
        
        ATR:ATRIP:p-RPA:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        TOPBP1 [nucleoplasm] (Gallus gallus)
        
        p-Y104-RAD52:p-RPA:ATR:ATRIP:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        ATR:ATRIP:p-RPA:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        TOPBP1 [nucleoplasm] (Gallus gallus)
        
        RAD52 promotes single strand annealing at resected DNA DSBs (Gallus gallus)
        
        RAD51:p-Y104-RAD52:p-RPA:ATR:ATRIP:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        p-Y104-RAD52:p-RPA:ATR:ATRIP:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        ATR:ATRIP:p-RPA:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        TOPBP1 [nucleoplasm] (Gallus gallus)
        
        RAD51:p-Y104-RAD52:p-RPA:ATR:ATRIP:DNA DSBs with annealed 3' ssDNA overhangs and displaced flaps:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        p-Y104-RAD52:p-RPA:ATR:ATRIP:DNA DSBs with annealed 3' ssDNA overhangs and displaced flaps:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        ATR:ATRIP:p-RPA:DNA DSBs with annealed 3' ssDNA overhangs and displaced flaps:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        TOPBP1 [nucleoplasm] (Gallus gallus)
      - Processing of DNA double-strand break ends (Gallus gallus)
        
        ATR activation at DNA DSBs (Gallus gallus)
        
        ATR:ATRIP:RPA:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        TOPBP1 [nucleoplasm] (Gallus gallus)
        
        TOPBP1 [nucleoplasm] (Gallus gallus)
        
        ATR phosphorylates RPA2 (Gallus gallus)
        
        ATR:ATRIP:RPA:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        TOPBP1 [nucleoplasm] (Gallus gallus)
        
        ATR:ATRIP:p-RPA:3' overhanging ssDNA-DSBs:p-MRN:p-S1981,Ac-K3016-ATM:KAT5:BRCA1-C complex:EXO1,DNA2:BLM,WRN:p-S990,Ac-K1249-BRIP1:RAD17:RFC:RAD9:HUS1:RAD1:RHNO1:TOPBP1 [nucleoplasm] (Gallus gallus)
        
        TOPBP1 [nucleoplasm] (Gallus gallus)

External Reference Information

External Reference

UniProt:A0A1D5P3M9

Reference Genes

BioGPS Gene:420694

ENSEMBL:ENSGALG00000034461

KEGG Gene (Gallus gallus):420694

Monarch:420694

NCBI Gene:420694

Reference Transcript

Other Identifiers

420694

GO:0000228

GO:0000794

GO:0001673

GO:0003674

GO:0005575

GO:0005622

GO:0005634

GO:0005654

GO:0005694

GO:0005856

GO:0005886

GO:0006950

GO:0006974

GO:0008150

GO:0010212

GO:0015629

GO:0016604

GO:0016605

GO:0042802

GO:0043226

GO:0043231

GT_A_87_P024161

GT_A_87_P038705

GT_A_87_P151448

GT_A_87_P275293

Gga.11098.1.S1_s_at

GgaAffx.23635.1.S1_at

GgaAffx.23637.1.S1_at

GgaAffx.7463.1.S1_at

GgaAffx.7464.1.S1_at

Participates

as a component of

as an output of

RAD51 binds BRCA2 at resected DNA DSBs (Gallus gallus)

as an input of

ATR activation at DNA DSBs (Gallus gallus)

Inferred From

TOPBP1 [nucleoplasm] (Homo sapiens)

Cross References

RefSeq

XP_015137236.1, XP_015137235.1

Ensembl

ENSGALP00000047284, ENSGALT00000080851, ENSGALG00000034461

PDB

6HM5

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