Reactome | col11a1b [endoplasmic reticulum lumen]

col11a1b [endoplasmic reticulum lumen]

Stable Identifier

R-DRE-2173259

Type

Protein [EntityWithAccessionedSequence]

Species

Danio rerio

Compartment

endoplasmic reticulum lumen

Synonyms

3x4Hyp-3Hyp-GlcGalHyl-COL28A1, D6MUD3

External Reference Information

External Reference

UniProt:D6MUD3

Gene Names

col11a1b

Reference Genes

BioGPS Gene:555202 col11a1b

CTD Gene:555202 col11a1b

ENSEMBL:ENSDARG00000009014

KEGG:dre:555202 col11a1b

Monarch:555202 col11a1b

NCBI Gene:555202 col11a1b

UCSC:D6MUD3 col11a1b

Reference Transcript

RefSeq:NM_001184954.1 col11a1b

Other Identifiers

13087496

13278468

13284434

555202

A_15_P198456

A_15_P265301

A_15_P319066

A_15_P436525

A_15_P671961

CUST_12727_PI428451953

CUST_12728_PI428451953

CUST_12729_PI428451953

DRER06045

ENSDART00000003503

ENSDART00000049589

ENSDART00000049589_1

ENSDART00000049589_2

GO:0005198

GO:0005201

GT_Spec_NM_001184954.1_152646

LOLS03864

MADDr01013943

XM_677653

XM_683016

XM_701500

Other forms of this molecule

col11a1b [endoplasmic reticulum lumen]

col11a1b [extracellular region]

Inferred From

3x4Hyp-3Hyp-GlcGalHyl-COL28A1 [endoplasmic reticulum lumen] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

O5-glucosylgalactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-glucosylgalactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-glucosylgalactosyl-L-hydroxylysine.

Cross References

RefSeq

NP_001171883.1

ENSEMBL

ENSDARG00000009014, ENSDARP00000049588, ENSDART00000049589

ZFIN

ZDB-GENE-070912-607