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taf9 [nucleoplasm]
Stable Identifier
R-DRE-212452
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
nucleoplasm
Synonyms
TAF9, F1QDT4
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Danio rerio)
RNA Polymerase II Transcription (Danio rerio)
Generic Transcription Pathway (Danio rerio)
Transcriptional Regulation by TP53 (Danio rerio)
Regulation of TP53 Activity (Danio rerio)
Regulation of TP53 Activity through Phosphorylation (Danio rerio)
TAF1 phosphorylates TP53 (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
RNA Polymerase II Pre-transcription Events (Danio rerio)
Abortive Initiation Before Second Transition (Danio rerio)
Pol II Promoter Escape Complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Abortive initiation after formation of the first phosphodiester bond (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
pol II transcription complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Fall Back to Closed Pre-initiation Complex (Danio rerio)
pol II closed pre-initiation complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
pol II open pre-initiation complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
RNA Polymerase II Transcription Initiation And Promoter Clearance (Danio rerio)
RNA Polymerase II Promoter Escape (Danio rerio)
Addition of Nucleotides 5 through 9 on the growing Transcript (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
pol II transcription complex containing 4 nucleotide long transcript [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Addition of the fourth nucleotide on the Nascent Transcript: Second Transition (Danio rerio)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
pol II transcription complex containing 4 nucleotide long transcript [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Addition of the third nucleotide on the nascent transcript (Danio rerio)
pol II transcription complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Unwinding DNA for the nascent transcript (Danio rerio)
pol II transcription complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Unwinding of DNA for the Nascent Transcript: Second Transition (Danio rerio)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
RNA Polymerase II Promoter Opening: First Transition (Danio rerio)
pol II closed pre-initiation complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
pol II open pre-initiation complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
RNA Polymerase II Transcription Initiation (Danio rerio)
NTP Binds Active Site of RNA Polymerase II (Danio rerio)
Pol II initiation complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
pol II open pre-initiation complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Newly Formed Phosphodiester Bond Stabilized and PPi Released (Danio rerio)
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
pol II transcription complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Nucleophillic Attack by 3'-hydroxyl Oxygen of nascent transcript on the Alpha Phosphate of NTP (Danio rerio)
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Pol II initiation complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening (Danio rerio)
Binding of TFIIA and TFIIB to the pol II promoter:TFIID complex (Danio rerio)
pol II promoter:TFIID complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Binding of TFIIE to the growing preinitiation complex (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF:TFIIE complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Formation of the closed pre-initiation complex (Danio rerio)
pol II closed pre-initiation complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF:TFIIE complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Recognition and Binding of Core Promoter Elements by TFIID (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
pol II promoter:TFIID complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Recruitment of RNA Polymerase II Holoenzyme by TFIIF to the pol II promoter:TFIID:TFIIA:TFIIB complex (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Danio rerio)
pol II promoter:TFIID complex [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
RNA polymerase II transcribes snRNA genes (Danio rerio)
CDK7 phosphorylates serine-5 and serine-7 of heptad repeats in C-terminal domain of RNA polymerase II at snRNA promoter (Danio rerio)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Danio rerio)
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
General transcription factors bind SNAPc:POU2F1:ZNF143:snRNA gene (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Integrator complex processes the 3' end of snRNA (Danio rerio)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:CBCAP:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Pre-snRNA is elongated and capped with 7-methylguanosine (Danio rerio)
RNA polymerase II (phosphoserine-2,7):RPAP2:Integrator:LEC:capped pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
Pre-snRNA transcript initiation, Integrator binding, LEC binding (Danio rerio)
RNA polymerase II (phosphoserine-5,7):RPRD1A,B:RPRD2:RPAP2:Integrator:LEC:pre-snRNA:Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
RNA polymerase II binds initiation factors at promoter of snRNA gene (U1, U2, U4, U4atac, U5, U11, U12) (Danio rerio)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Danio rerio)
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Danio rerio)
snTAFc [nucleoplasm] (Danio rerio)
taf9 [nucleoplasm] (Danio rerio)
External Reference Information
External Reference
UniProt:F1QDT4
Gene Names
taf9
Reference Genes
BioGPS Gene:321485 taf9
ENSEMBL:ENSDARG00000077870
KEGG:dre:321485 taf9
Monarch:321485 taf9
NCBI Gene:321485 taf9
UCSC:F1QDT4 taf9
Reference Transcript
RefSeq:NM_001044395.2 taf9
Other Identifiers
13117758
321485
A_15_P149716
A_15_P260016
A_15_P461535
CJ005414
CJ005415
CJ005416
CJ005417
CJ005418
CUST_17896_PI428451953
CUST_17897_PI428451953
CUST_201_PI428451958
DRER19377
DRER48979
DRER49122
DRER49318
DRER49514
DRER49741
DRER57962
Dr.1499.1.S1_at
ENSDART00000085667
ENSDART00000085667_1
ENSDART00000085667_2
GO:0000124
GO:0003713
GO:0005634
GO:0005669
GO:0006352
GO:0006355
GO:0016251
GO:0045893
GO:0046982
GO:0051123
GO:0065003
GT_Spec_NM_001044395.2_180475
JP005813
JP005814
JP005815
JP005816
JP005817
LOLS11361
MADDr01003937
ZV700S00001609
Participates
as a component of
snTAFc [nucleoplasm] (Danio rerio)
TFIID [nucleoplasm] (Danio rerio)
Other forms of this molecule
taf9 [nucleoplasm]
taf9 [nucleoplasm]
Inferred From
TAF9 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_001037860.2
ENSEMBL
ENSDARP00000098102
,
ENSDART00000111885
,
ENSDARG00000077870
ZFIN
ZDB-GENE-030131-204
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