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gpc3 [Golgi lumen]
Stable Identifier
R-DRE-2063987
Type
Protein [EntityWithAccessionedSequence]
Species
Danio rerio
Compartment
Golgi lumen
Synonyms
Gal-Gal-Xyl-GPC3, Q6V9Y8
Locations in the PathwayBrowser
Expand all
Metabolism (Danio rerio)
Metabolism of carbohydrates and carbohydrate derivatives (Danio rerio)
Glycosaminoglycan metabolism (Danio rerio)
Glycosaminoglycan-protein linkage region biosynthesis (Danio rerio)
B3GALT6 transfers Gal to the tetrasaccharide linker (Danio rerio)
Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
gpc3 [Golgi lumen] (Danio rerio)
B3GAT dimers transfer GlcA to tetrasaccharide linker (Danio rerio)
Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
gpc3 [Golgi lumen] (Danio rerio)
External Reference Information
External Reference
UniProt:Q6V9Y8
Gene Names
gpc3
Reference Genes
BioGPS Gene:387365 gpc3
ENSEMBL:ENSDARG00000032199
KEGG:dre:387365 gpc3
Monarch:387365 gpc3
NCBI Gene:387365 gpc3
UCSC:Q6V9Y8 gpc3
Reference Transcript
RefSeq:NM_001305618.1 gpc3
Other Identifiers
13015577
13277312
387365
A_15_P190951
CUST_8911_PI428451953
CUST_8912_PI428451953
CUST_8913_PI428451953
CUST_9191_PI428451958
DRER04740
DRER29580
DRER42441
ENSDART00000039554
ENSDART00000039554_1
ENSDART00000039554_2
GO:0005886
GO:0009966
GO:0030312
GO:0031012
GO:0062023
GT_Spec_XM_682922.6_298065
LOLT00025
MADDr01008276
OTTDART00000026799
OTTDART00000026800
XM_682922
Participates
as a member of
Gal-Gal-Xyl-proteins [Golgi lumen] (Danio rerio)
Other forms of this molecule
gpc3 [plasma membrane]
gpc3 [plasma membrane]
gpc3 [plasma membrane]
gpc3 [plasma membrane]
gpc3 [plasma membrane]
gpc3 [plasma membrane]
gpc3 [endoplasmic reticulum lumen]
phospho-gpc3 [endoplasmic reticulum lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [Golgi lumen]
gpc3 [lysosomal lumen]
gpc3 [Golgi lumen]
Inferred From
Gal-Gal-Xyl-GPC3 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (O3-(β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine residue) at unknown position
Modification
O3-(β-D-galactosyl-(1→3)-β-D-galactosyl-(1→4)-β-D-xylosyl)-L-serine residue
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_001292547.1
ENSEMBL
ENSDARG00000032199
,
ENSDART00000173108
,
ENSDARP00000142166
ZFIN
ZDB-GENE-031212-1
PRO
Q6V9Y8
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