Reactome | LOC106559787 [cytosol]

LOC106559787 [cytosol]

Stable Identifier

R-CFA-72418

Type

Protein [EntityWithAccessionedSequence]

Species

Canis familiaris

Compartment

cytosol

Synonyms

RPL17, A0A8I3NAG9

Locations in the PathwayBrowser

Expand all

Metabolism of RNA (Canis familiaris)

- Nonsense-Mediated Decay (NMD) (Canis familiaris)
  - Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Canis familiaris)
    - SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Canis familiaris)
      - SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Canis familiaris)
        
        Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Canis familiaris)
        
        80S ribosome [cytosol] (Canis familiaris)
        
        60S ribosomal complex [cytosol] (Canis familiaris)
        
        LOC106559787 [cytosol] (Canis familiaris)
      - SMG1:UPF1:EJC:Translated mRNP [cytosol] (Canis familiaris)
        
        Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Canis familiaris)
        
        80S ribosome [cytosol] (Canis familiaris)
        
        60S ribosomal complex [cytosol] (Canis familiaris)
        
        LOC106559787 [cytosol] (Canis familiaris)
    - SMG6 hydrolyzes mRNA with premature termination codon (Canis familiaris)
      - Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Canis familiaris)
        
        Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Canis familiaris)
        
        80S ribosome [cytosol] (Canis familiaris)
        
        60S ribosomal complex [cytosol] (Canis familiaris)
        
        LOC106559787 [cytosol] (Canis familiaris)
    - UPF1 binds an mRNP with a termination codon preceding an Exon Junction Complex (Canis familiaris)
      - SMG1:UPF1:EJC:Translated mRNP [cytosol] (Canis familiaris)
        
        Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Canis familiaris)
        
        80S ribosome [cytosol] (Canis familiaris)
        
        60S ribosomal complex [cytosol] (Canis familiaris)
        
        LOC106559787 [cytosol] (Canis familiaris)
      - Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Canis familiaris)
        
        80S ribosome [cytosol] (Canis familiaris)
        
        60S ribosomal complex [cytosol] (Canis familiaris)
        
        LOC106559787 [cytosol] (Canis familiaris)
    - p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Canis familiaris)
      - Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Canis familiaris)
        
        Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Canis familiaris)
        
        80S ribosome [cytosol] (Canis familiaris)
        
        60S ribosomal complex [cytosol] (Canis familiaris)
        
        LOC106559787 [cytosol] (Canis familiaris)
      - SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Canis familiaris)
        
        Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Canis familiaris)
        
        80S ribosome [cytosol] (Canis familiaris)
        
        60S ribosomal complex [cytosol] (Canis familiaris)
        
        LOC106559787 [cytosol] (Canis familiaris)
  - Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Canis familiaris)
    - Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Canis familiaris)
      - Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Canis familiaris)
        
        80S ribosome [cytosol] (Canis familiaris)
        
        60S ribosomal complex [cytosol] (Canis familiaris)
        
        LOC106559787 [cytosol] (Canis familiaris)
      - UPF1:eRF3 Complex on Translated mRNA [cytosol] (Canis familiaris)
        
        Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Canis familiaris)
        
        80S ribosome [cytosol] (Canis familiaris)
        
        60S ribosomal complex [cytosol] (Canis familiaris)
        
        LOC106559787 [cytosol] (Canis familiaris)
- rRNA processing (Canis familiaris)
  - rRNA processing in the nucleus and cytosol (Canis familiaris)
    - Major pathway of rRNA processing in the nucleolus and cytosol (Canis familiaris)
      - 12S pre-rRNA is nucleolytically processed to yield 5.8S rRNA (Canis familiaris)
        
        60S ribosomal complex [cytosol] (Canis familiaris)
        
        LOC106559787 [cytosol] (Canis familiaris)

External Reference Information

External Reference

UniProt:A0A8I3NAG9

Gene Names

LOC106559787

Reference Genes

BioGPS Gene:106559787 LOC106559787

ENSEMBL:ENSCAFG00845009081.1

ENSEMBL_canis_lupus_familiaris_GENE:ENSCAFG00845009081.1 LOC106559787

KEGG Gene (Canis lupus familiaris):106559787 LOC106559787

Monarch:106559787 LOC106559787

NCBI Gene:106559787 LOC106559787

Reference Transcript

RefSeq:XM_014119737.1 LOC106559787

Other Identifiers

106559787

Cfa.709.1.A1_x_at

GO:0003735

GO:0005198

GO:0005840

GO:0006412

GO:0015934

GO:0043226

GO:1990904

Participates

as a component of

Inferred From

RPL17 [cytosol] (Homo sapiens)

Cross References

RefSeq

XP_013975212.1

Ensembl

ENSCAFP00845012444, ENSCAFG00845009081, ENSCAFT00845016001

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