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Heparan(3)-SDC1 [Golgi lumen]
Stable Identifier
R-CFA-2076314
Type
Protein [EntityWithAccessionedSequence]
Species
Canis familiaris
Compartment
Golgi lumen
Synonyms
E2RT70
Locations in the PathwayBrowser
Expand all
Metabolism (Canis familiaris)
Metabolism of carbohydrates (Canis familiaris)
Glycosaminoglycan metabolism (Canis familiaris)
Heparan sulfate/heparin (HS-GAG) metabolism (Canis familiaris)
HS-GAG biosynthesis (Canis familiaris)
EXT1:EXT2 transfers GlcA to heparan (Canis familiaris)
Heparan(3)-PGs [Golgi lumen] (Canis familiaris)
Heparan(3)-SDC1 [Golgi lumen] (Canis familiaris)
NDST1-4 N-deacetylates GlcNAc residues in heparan (Canis familiaris)
Heparan(3)-PGs [Golgi lumen] (Canis familiaris)
Heparan(3)-SDC1 [Golgi lumen] (Canis familiaris)
External Reference Information
External Reference
UniProt:E2RT70
Reference Genes
BioGPS Gene:482986
ENSEMBL:ENSCAFG00000003833
Monarch:482986
NCBI Gene:482986
Reference Transcript
RefSeq:XM_540099.4
Other Identifiers
482986
AAEX03010759
AAEX03010760
CfaAffx.6691.1.S1_at
ENSCAFG00000003833
ENSCAFP00000005712
ENSCAFT00000006168
EntrezGene:482986
EntrezGene:SDC1
GO:0005575
GO:0005623
GO:0006950
GO:0008150
GO:0009986
GO:0016020
GO:0016021
GO:0016477
GO:0040011
GO:0042060
GO:0048870
IPR001050
IPR003585
IPR027789
IPR030479
IPR031190
PF01034
SDC1
SDC1-202
SM00294
UPI00004BC7B0
VGNC:45942
XM_540099
XP_540099
Participant Of
hasMember
Heparan(3)-PGs [Golgi lumen]
Other forms of this molecule
SDC1 [plasma membrane]
Heparan-SDC1 [Golgi lumen]
Heparan(1)-SDC1 [Golgi lumen]
Heparan(2)-SDC1 [Golgi lumen]
Heparan(4)-SDC1 [Golgi lumen]
HS(5)-SDC1 [plasma membrane]
HS(3)-SDC1 [plasma membrane]
HS(1)-SDC1 [plasma membrane]
HS(2)-SDC1 [plasma membrane]
HS(4)-SDC1 [plasma membrane]
HS(1)-SDC1 [Golgi lumen]
HS(6)-SDC1 [Golgi lumen]
HS(3)-SDC1 [Golgi lumen]
HS(2)-SDC1 [Golgi lumen]
HS(4)-SDC1 [Golgi lumen]
HS(5)-SDC1 [Golgi lumen]
HS(6)-SDC1 [plasma membrane]
SDC1 [lysosomal lumen]
HS(6)-SDC1 [lysosomal lumen]
SDC1 [Golgi lumen]
XylS-SDC1 [Golgi lumen]
Gal-Xyl-SDC1 [Golgi lumen]
GlcA-Gal-Gal-Xyl-SDC1 [Golgi lumen]
Gal-Gal-Xyl-SDC1 [Golgi lumen]
Inferred From
Heparan(3)-SDC1 [Golgi lumen] (Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63649) at unknown position
Modification
beta-D-GlcA-(1->4)-alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNAc-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
XP_540099.3
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