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APEX1 [nucleoplasm]
Stable Identifier
R-CEL-50119
Type
Protein [EntityWithAccessionedSequence]
Species
Caenorhabditis elegans
Compartment
nucleoplasm
Synonyms
G5EBR7
Locations in the PathwayBrowser
Expand all
DNA Repair (Caenorhabditis elegans)
Base Excision Repair (Caenorhabditis elegans)
Resolution of Abasic Sites (AP sites) (Caenorhabditis elegans)
APEX1 mediates endonucleolytic cleavage at the 5' side of the AP site (Caenorhabditis elegans)
APEX1 [nucleoplasm] (Caenorhabditis elegans)
APEX1:AP-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1 [nucleoplasm] (Caenorhabditis elegans)
APEX1:SSB(AP->5'-dRP)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1 [nucleoplasm] (Caenorhabditis elegans)
Displacement of DNA glycosylase by APEX1 (Caenorhabditis elegans)
Displacement of NTHL1 glycosylase by APEX1 at the AP site (Caenorhabditis elegans)
APEX1 [nucleoplasm] (Caenorhabditis elegans)
APEX1:AP-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1 [nucleoplasm] (Caenorhabditis elegans)
Resolution of AP sites via the multiple-nucleotide patch replacement pathway (Caenorhabditis elegans)
Oxidative damage to the AP site (Caenorhabditis elegans)
APEX1:SSB(5'-ddRP)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1 [nucleoplasm] (Caenorhabditis elegans)
APEX1:SSB(AP->5'-dRP)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1 [nucleoplasm] (Caenorhabditis elegans)
PCNA-Dependent Long Patch Base Excision Repair (Caenorhabditis elegans)
LIG1 binds APEX1 and PCNA at SSB (Caenorhabditis elegans)
APEX1:PCNA:POLD,POLE:RPA:RFC:SSB(3'poly-dNMP)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1 [nucleoplasm] (Caenorhabditis elegans)
LIG1:APEX1:PCNA:POLD,POLE:RPA:RFC:SSB:(3'poly-dNMP)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1:PCNA:POLD,POLE:RPA:RFC:SSB(3'poly-dNMP)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1 [nucleoplasm] (Caenorhabditis elegans)
LIG1 bound to APEX1 and PCNA ligates SSB (Caenorhabditis elegans)
LIG1:APEX1:PCNA:POLD,POLE:RPA:RFC:SSB:(3'poly-dNMP)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1:PCNA:POLD,POLE:RPA:RFC:SSB(3'poly-dNMP)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1 [nucleoplasm] (Caenorhabditis elegans)
LIG1:APEX1:PCNA:POLD,POLE:RPA:RFC:dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1 [nucleoplasm] (Caenorhabditis elegans)
POLD,POLE-mediated DNA strand displacement synthesis (Caenorhabditis elegans)
APEX1:FEN1:PCNA:POLD,POLE:RPA:RFC:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1 [nucleoplasm] (Caenorhabditis elegans)
APEX1:FEN1:PCNA:POLD,POLE:RPA:RFC:SSB(3'poly-dNMP-displaced 5'ddRP flap)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1 [nucleoplasm] (Caenorhabditis elegans)
External Reference Information
External Reference
UniProt:G5EBR7
Reference Genes
BioGPS Gene:173069
CTD Gene:173069
ENSEMBL:WBGene00001372
KEGG:cel:CELE_R09B3.1
Monarch:173069
NCBI Gene:173069
UCSC:G5EBR7
Wormbase:WBGene00001372
Wormbase:WBGene00001372
Reference Transcript
RefSeq:NM_001026413.3
Other Identifiers
173069
18472238
192742_s_at
A_12_P107387
CE16306
CE_WBGene00001372_A
CE_WBGene00001372_C
CGZ0031511
CGZ0031512
GO:0002119
GO:0003824
GO:0003906
GO:0004518
GO:0004519
GO:0004527
GO:0005634
GO:0006281
GO:0006284
GO:0008081
GO:0008311
GO:0009792
GO:0016787
GO:0043226
GO:0046872
GO:0048856
GO:0140097
R09B3.1
R09B3.1a_509-568_0.933_2_B
R09B3.1a_599-658_0.923_3_C
R09B3.1a_727-786_0.949_1_A
R09B3_1aP00693
R09B3_1aP00765
R09B3_1aP00808
R09B3_1bP00091
R09B3_1bP00267
R09B3_1bP00340
WBGene00001372
cea2.c.05320
Participates
as a component of
LIG1:APEX1:PCNA:POLD,POLE:RPA:RFC:dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1:PCNA:POLD,POLE:RPA:RFC:SSB(3'poly-dNMP)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1:FEN1:PCNA:POLD,POLE:RPA:RFC:SSB(3'poly-dNMP-displaced 5'ddRP flap)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1:FEN1:PCNA:POLD,POLE:RPA:RFC:SSB(3'dNMP-displaced 5'ddRP)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1:SSB(AP->5'-dRP)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1:SSB(5'-ddRP)-dsDNA [nucleoplasm] (Caenorhabditis elegans)
APEX1:AP-dsDNA [nucleoplasm] (Caenorhabditis elegans)
as an input of
Displacement of NTHL1 glycosylase by APEX1 at the AP site (Caenorhabditis elegans)
Inferred From
APEX1 [nucleoplasm]
(Homo sapiens)
Cross References
ENSEMBL
R09B3.1a.1
,
WBGene00001372
,
R09B3.1a.2
,
R09B3.1a.2
,
R09B3.1a.1
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