Reactome | sdn-1 [plasma membrane]

sdn-1 [plasma membrane]

Stable Identifier

R-CEL-2076672

Type

Protein [EntityWithAccessionedSequence]

Species

Caenorhabditis elegans

Compartment

plasma membrane

Synonyms

HS(1)-SDC1, P50605

Locations in the PathwayBrowser

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Metabolism (Caenorhabditis elegans)

- Metabolism of carbohydrates (Caenorhabditis elegans)
  - Glycosaminoglycan metabolism (Caenorhabditis elegans)
    - Heparan sulfate/heparin (HS-GAG) metabolism (Caenorhabditis elegans)
      - HS-GAG biosynthesis (Caenorhabditis elegans)
        
        Some HSPGs are secreted to the plasma membrane (Caenorhabditis elegans)
        
        HSPGs [plasma membrane] (Caenorhabditis elegans)
        
        HS(1)-PGs [plasma membrane] (Caenorhabditis elegans)
        
        sdn-1 [plasma membrane] (Caenorhabditis elegans)

External Reference Information

External Reference

UniProt:P50605

Gene Names

sdn-1

Reference Genes

BioGPS Gene:181259 sdn-1

CTD Gene:181259 sdn-1

ENSEMBL:WBGene00004749

Monarch:181259 sdn-1

NCBI Gene:181259 sdn-1

UCSC:P50605 sdn-1

Wormbase:WBGene00004749

Reference Transcript

RefSeq:NM_171972.4 sdn-1

Other Identifiers

173872_at

181259

18627820

190774_s_at

A_12_P102309

A_12_P102783

CE05996

CE_WBGene00004749_A

CGZ0024969

F57C7.3

F57C7.3a

F57C7.3a_585-644_0.932_5_C

F57C7.3a_731-790_0.947_1_B

F57C7.3a_794-853_0.945_2_A

F57C7.3b

F57C7_3aP00012

F57C7_3aP00153

F57C7_3aP00535

F57C7_3bP00013

GO:0000902

GO:0002119

GO:0003674

GO:0005515

GO:0005575

GO:0005622

GO:0005737

GO:0007411

GO:0008150

GO:0009790

GO:0009792

GO:0009986

GO:0016020

GO:0016021

GO:0016477

GO:0030054

GO:0030154

GO:0040011

GO:0048730

GO:0048856

GO:0048870

WBGene00004749

cea2.d.29895

cea2.p.147727

Participant Of

input

hasComponent

hasMember

Other forms of this molecule

phospho-sdn-1 [plasma membrane]

phospho-sdn-1 [endoplasmic reticulum lumen]

sdn-1 [endoplasmic reticulum lumen]

sdn-1 [plasma membrane]

sdn-1 [lysosomal lumen]

sdn-1 [plasma membrane]

sdn-1 [Golgi lumen]

Inferred From

Syndecans1-4 [plasma membrane] (Homo sapiens)

SDC1, 2, 4, (3) [plasma membrane] (Homo sapiens)

Syndecan-1 [plasma membrane] (Homo sapiens)

HS(1)-SDC1 [plasma membrane] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (ChEBI:63652) at unknown position

Modification

beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

NP_741894.1

PRO

P50605

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