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sdn-1 [plasma membrane]
Stable Identifier
R-CEL-2076672
Type
Protein [EntityWithAccessionedSequence]
Species
Caenorhabditis elegans
Compartment
plasma membrane
Synonyms
HS(1)-SDC1, P50605
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Caenorhabditis elegans)
Non-integrin membrane-ECM interactions (Caenorhabditis elegans)
Syndecan interactions (Caenorhabditis elegans)
Syndecan-1 binds Integrins alpha2beta1, (alpha6beta4) (Caenorhabditis elegans)
Syndecan-1:Integrin alpha2beta1 (alpha6beta4) [plasma membrane] (Caenorhabditis elegans)
sdn-1 [plasma membrane] (Caenorhabditis elegans)
sdn-1 [plasma membrane] (Caenorhabditis elegans)
Syndecans 1, 2, 4, (3) bind FGF2 (Caenorhabditis elegans)
SDC1,2,4,(3):FGF2 [plasma membrane] (Caenorhabditis elegans)
sdn-1 [plasma membrane] (Caenorhabditis elegans)
sdn-1 [plasma membrane] (Caenorhabditis elegans)
Metabolism (Caenorhabditis elegans)
Metabolism of carbohydrates (Caenorhabditis elegans)
Glycosaminoglycan metabolism (Caenorhabditis elegans)
Heparan sulfate/heparin (HS-GAG) metabolism (Caenorhabditis elegans)
HS-GAG biosynthesis (Caenorhabditis elegans)
Some HSPGs are secreted to the plasma membrane (Caenorhabditis elegans)
HSPGs [plasma membrane] (Caenorhabditis elegans)
HS(1)-PGs [plasma membrane] (Caenorhabditis elegans)
sdn-1 [plasma membrane] (Caenorhabditis elegans)
External Reference Information
External Reference
UniProt:P50605
Gene Names
sdn-1
Reference Genes
BioGPS Gene:181259 sdn-1
CTD Gene:181259 sdn-1
ENSEMBL:WBGene00004749
Monarch:181259 sdn-1
NCBI Gene:181259 sdn-1
UCSC:P50605 sdn-1
Wormbase:WBGene00004749
Reference Transcript
RefSeq:NM_171972.4 sdn-1
Other Identifiers
173872_at
181259
18627820
190774_s_at
A_12_P102309
A_12_P102783
CE05996
CE_WBGene00004749_A
CGZ0024969
F57C7.3
F57C7.3a
F57C7.3a_585-644_0.932_5_C
F57C7.3a_731-790_0.947_1_B
F57C7.3a_794-853_0.945_2_A
F57C7.3b
F57C7_3aP00012
F57C7_3aP00153
F57C7_3aP00535
F57C7_3bP00013
GO:0000902
GO:0002119
GO:0003674
GO:0005515
GO:0005575
GO:0005622
GO:0005737
GO:0007411
GO:0008150
GO:0009790
GO:0009792
GO:0009986
GO:0016020
GO:0016021
GO:0016477
GO:0030054
GO:0030154
GO:0040011
GO:0048730
GO:0048856
GO:0048870
WBGene00004749
cea2.d.29895
cea2.p.147727
Participant Of
input
Syndecan-1 binds Integrins alpha2beta1, (alpha6beta4)
Syndecans 1, 2, 4, (3) bind FGF2
hasComponent
SDC1,2,4,(3):FGF2 [plasma membrane]
Syndecan-1:Integrin alpha2beta1 (alpha6beta4) [plasma membrane]
hasMember
HS(1)-PGs [plasma membrane]
Proteoglycans,TGFB1 [plasma membrane]
Other forms of this molecule
phospho-sdn-1 [plasma membrane]
phospho-sdn-1 [endoplasmic reticulum lumen]
sdn-1 [endoplasmic reticulum lumen]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [lysosomal lumen]
sdn-1 [lysosomal lumen]
sdn-1 [lysosomal lumen]
sdn-1 [lysosomal lumen]
sdn-1 [lysosomal lumen]
sdn-1 [lysosomal lumen]
sdn-1 [lysosomal lumen]
sdn-1 [lysosomal lumen]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [plasma membrane]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
sdn-1 [Golgi lumen]
Inferred From
Syndecans1-4 [plasma membrane] (Homo sapiens)
SDC1, 2, 4, (3) [plasma membrane] (Homo sapiens)
Syndecan-1 [plasma membrane] (Homo sapiens)
HS(1)-SDC1 [plasma membrane] (Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63652) at unknown position
Modification
beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->4)-alpha-D-GlcNS-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_741894.1
PRO
P50605
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