{
  "dbId" : 11107974,
  "stId" : "R-SCE-5696398",
  "speciesName" : "Saccharomyces cerevisiae",
  "nodes" : [ {
    "dbId" : 11097770,
    "stId" : "R-SCE-6781855",
    "displayName" : "phospho-Ub,p-S2,S5(CTD)-POLR2A [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P04050",
    "standardIdentifier" : "uniprot:P04050",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11097772 ],
    "children" : [ ]
  }, {
    "dbId" : 11097772,
    "stId" : "R-SCE-6781851",
    "displayName" : "Ubiquitinated RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097903, 11097901, 11097908, 11097892, 11097871, 11097860, 11097774 ],
    "children" : [ 11082005, 11082000, 11081980, 11082013, 11082009, 11081990, 11082021, 11082017, 11081985, 11084110, 11097770, 11081995, 11082025 ]
  }, {
    "dbId" : 11097774,
    "stId" : "R-SCE-6781861",
    "displayName" : "Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097854 ],
    "children" : [ 11082996, 11097772, 110291 ]
  }, {
    "dbId" : 9684123,
    "stId" : "R-ALL-9684123",
    "displayName" : "Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm]",
    "schemaClass" : "OtherEntity",
    "speciesId" : 0,
    "parents" : [ 11097860 ],
    "children" : [ ]
  }, {
    "dbId" : 11097763,
    "stId" : "R-SCE-52835",
    "displayName" : "RAD28 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "Q12021",
    "standardIdentifier" : "uniprot:Q12021",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "RAD28" ],
    "parents" : [ 11097767 ],
    "children" : [ ]
  }, {
    "dbId" : 11097765,
    "stId" : "R-SCE-976081",
    "displayName" : "Ghost homologue of CUL4 [nucleoplasm]",
    "schemaClass" : "GenomeEncodedEntity",
    "speciesId" : 68322,
    "parents" : [ 11097767 ],
    "children" : [ ]
  }, {
    "dbId" : 11097767,
    "stId" : "R-SCE-6781841",
    "displayName" : "ERCC8:DDB1:CUL4:RBX1 [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097903, 11097901, 11097908, 11097892, 11097875, 11097864, 11097856 ],
    "children" : [ 11097765, 11097763, 11097758, 11097756 ]
  }, {
    "dbId" : 11097785,
    "stId" : "R-SCE-5688915",
    "displayName" : "Ghost homologue of UVSSA [nucleoplasm]",
    "schemaClass" : "GenomeEncodedEntity",
    "speciesId" : 68322,
    "parents" : [ 11097787 ],
    "children" : [ ]
  }, {
    "dbId" : 11097787,
    "stId" : "R-SCE-6781845",
    "displayName" : "UVSSA:USP7 [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097903, 11097901, 11097908, 11097892, 11097877, 11097866, 11097858 ],
    "children" : [ 11096879, 11097785 ]
  }, {
    "dbId" : 11080634,
    "stId" : "R-SCE-68429",
    "displayName" : "RFC4 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P40348",
    "standardIdentifier" : "uniprot:P40348",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11080651 ],
    "children" : [ ]
  }, {
    "dbId" : 11080639,
    "stId" : "R-SCE-68431",
    "displayName" : "RFC3 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P38251",
    "standardIdentifier" : "uniprot:P38251",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11080651 ],
    "children" : [ ]
  }, {
    "dbId" : 6781820,
    "stId" : "R-ALL-6781820",
    "displayName" : "Damaged dsDNA with open transcription bubble [nucleoplasm]",
    "schemaClass" : "OtherEntity",
    "speciesId" : 0,
    "parents" : [ 11097727 ],
    "children" : [ ]
  }, {
    "dbId" : 11080629,
    "stId" : "R-SCE-68427",
    "displayName" : "RFC5 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P38629",
    "standardIdentifier" : "uniprot:P38629",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11080651 ],
    "children" : [ ]
  }, {
    "dbId" : 11097739,
    "stId" : "R-SCE-54429",
    "displayName" : "ERCC6 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "diagramIds" : [ 24700 ],
    "identifier" : "P40352",
    "standardIdentifier" : "uniprot:P40352",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11097903, 11097901, 11097908, 11097892, 11097873, 11097862, 11097854, 11097741 ],
    "children" : [ ]
  }, {
    "dbId" : 11097741,
    "stId" : "R-SCE-6781837",
    "displayName" : "Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24701 ],
    "parents" : [ ],
    "children" : [ 11097731, 11097739 ]
  }, {
    "dbId" : 11097731,
    "stId" : "R-SCE-6781822",
    "displayName" : "Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24693 ],
    "parents" : [ 11097741 ],
    "children" : [ 11082996, 11082060, 110291 ]
  }, {
    "dbId" : 11097756,
    "stId" : "R-SCE-1234142",
    "displayName" : "RBX1 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "Q08273",
    "standardIdentifier" : "uniprot:Q08273",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11097767 ],
    "children" : [ ]
  }, {
    "dbId" : 11097758,
    "stId" : "R-SCE-53489",
    "displayName" : "Ghost homologue of DDB1 [nucleoplasm]",
    "schemaClass" : "GenomeEncodedEntity",
    "speciesId" : 68322,
    "parents" : [ 11097767 ],
    "children" : [ ]
  }, {
    "dbId" : 11082984,
    "stId" : "R-SCE-65918",
    "displayName" : "TFB2 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "Q02939",
    "standardIdentifier" : "uniprot:Q02939",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "TFB2" ],
    "parents" : [ 11082996 ],
    "children" : [ ]
  }, {
    "dbId" : 11082989,
    "stId" : "R-SCE-65912",
    "displayName" : "TFB1 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P32776",
    "standardIdentifier" : "uniprot:P32776",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "TFB1" ],
    "parents" : [ 11082996 ],
    "children" : [ ]
  }, {
    "dbId" : 11082979,
    "stId" : "R-SCE-65914",
    "displayName" : "SSL1 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "Q04673",
    "standardIdentifier" : "uniprot:Q04673",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "SSL1" ],
    "parents" : [ 11082996 ],
    "children" : [ ]
  }, {
    "dbId" : 11081980,
    "stId" : "R-SCE-63531",
    "displayName" : "RPB11 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P38902",
    "standardIdentifier" : "uniprot:P38902",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "RPB11" ],
    "parents" : [ 11097772, 11082060, 11083110 ],
    "children" : [ ]
  }, {
    "dbId" : 11080444,
    "stId" : "R-SCE-68473",
    "displayName" : "POLE [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P21951",
    "standardIdentifier" : "uniprot:P21951",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11080468 ],
    "children" : [ ]
  }, {
    "dbId" : 11097854,
    "stId" : "R-SCE-6782065",
    "displayName" : "Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097856 ],
    "children" : [ 11097774, 11097739 ]
  }, {
    "dbId" : 11082994,
    "stId" : "R-SCE-5688446",
    "displayName" : "TFB5 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "Q3E7C1",
    "standardIdentifier" : "uniprot:Q3E7C1",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "TFB5" ],
    "parents" : [ 11082996 ],
    "children" : [ ]
  }, {
    "dbId" : 30555,
    "stId" : "R-ALL-30555",
    "displayName" : "dNTP [nucleoplasm]",
    "schemaClass" : "SimpleEntity",
    "speciesId" : 0,
    "diagramIds" : [ 24718 ],
    "identifier" : "16516",
    "standardIdentifier" : "chebi:16516",
    "referenceType" : "ReferenceMolecule",
    "parents" : [ ],
    "children" : [ ]
  }, {
    "dbId" : 11082996,
    "stId" : "R-SCE-109634",
    "displayName" : "TFIIH [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24696 ],
    "parents" : [ 11097727, 11097731, 11097774, 11097860, 11097871, 11097892, 11097908, 11097901, 11097903 ],
    "children" : [ 11082969, 11082984, 11082989, 11082974, 11082960, 11082979, 11082994, 11082964 ]
  }, {
    "dbId" : 11082953,
    "stId" : "R-SCE-69220",
    "displayName" : "CCL1 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P37366",
    "standardIdentifier" : "uniprot:P37366",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "CCL1" ],
    "parents" : [ 11082960 ],
    "children" : [ ]
  }, {
    "dbId" : 11080649,
    "stId" : "R-SCE-68435",
    "displayName" : "RFC1 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P38630",
    "standardIdentifier" : "uniprot:P38630",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11080651 ],
    "children" : [ ]
  }, {
    "dbId" : 11080651,
    "stId" : "R-SCE-68436",
    "displayName" : "RFC Heteropentamer [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24713 ],
    "parents" : [ 11097899 ],
    "children" : [ 11080644, 11080629, 11080639, 11080634, 11080649 ]
  }, {
    "dbId" : 6782213,
    "stId" : "R-ALL-6782213",
    "displayName" : "incised DNA without lesion:trimmed nascent mRNA [nucleoplasm]",
    "schemaClass" : "OtherEntity",
    "speciesId" : 0,
    "parents" : [ 11097901 ],
    "children" : [ ]
  }, {
    "dbId" : 6782212,
    "stId" : "R-ALL-6782212",
    "displayName" : "SSB-dsDNA:trimmed nascent mRNA [nucleoplasm]",
    "schemaClass" : "OtherEntity",
    "speciesId" : 0,
    "parents" : [ 11097903 ],
    "children" : [ ]
  }, {
    "dbId" : 5688114,
    "stId" : "R-ALL-5688114",
    "displayName" : "Distorted dsDNA [nucleoplasm]",
    "schemaClass" : "OtherEntity",
    "speciesId" : 0,
    "diagramIds" : [ 24697 ],
    "parents" : [ ],
    "children" : [ ]
  }, {
    "dbId" : 11097804,
    "stId" : "R-SCE-6781963",
    "displayName" : "ISY1 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P21374",
    "standardIdentifier" : "uniprot:P21374",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "ISY1" ],
    "parents" : [ 11097813 ],
    "children" : [ ]
  }, {
    "dbId" : 11082958,
    "stId" : "R-SCE-59012",
    "displayName" : "TFB3 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "Q03290",
    "standardIdentifier" : "uniprot:Q03290",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "TFB3" ],
    "parents" : [ 11082960 ],
    "children" : [ ]
  }, {
    "dbId" : 11097792,
    "stId" : "R-SCE-67411",
    "displayName" : "SYF1 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "Q04048",
    "standardIdentifier" : "uniprot:Q04048",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "SYF1" ],
    "parents" : [ 11097813 ],
    "children" : [ ]
  }, {
    "dbId" : 11097794,
    "stId" : "R-SCE-6781960",
    "displayName" : "Ghost homologue of AQR [nucleoplasm]",
    "schemaClass" : "GenomeEncodedEntity",
    "speciesId" : 68322,
    "parents" : [ 11097813 ],
    "children" : [ ]
  }, {
    "dbId" : 11082948,
    "stId" : "R-SCE-69218",
    "displayName" : "CDK7 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P06242",
    "standardIdentifier" : "uniprot:P06242",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11082960 ],
    "children" : [ ]
  }, {
    "dbId" : 11080644,
    "stId" : "R-SCE-68433",
    "displayName" : "RFC2 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P40339",
    "standardIdentifier" : "uniprot:P40339",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11080651 ],
    "children" : [ ]
  }, {
    "dbId" : 11097799,
    "stId" : "R-SCE-5420907",
    "displayName" : "PRP19 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P32523",
    "standardIdentifier" : "uniprot:P32523",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "PRP19" ],
    "parents" : [ 11097813 ],
    "children" : [ ]
  }, {
    "dbId" : 11082969,
    "stId" : "R-SCE-67439",
    "displayName" : "ERCC3 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "Q00578",
    "standardIdentifier" : "uniprot:Q00578",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11082996 ],
    "children" : [ ]
  }, {
    "dbId" : 11082974,
    "stId" : "R-SCE-65916",
    "displayName" : "TFB4 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "Q12004",
    "standardIdentifier" : "uniprot:Q12004",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "TFB4" ],
    "parents" : [ 11082996 ],
    "children" : [ ]
  }, {
    "dbId" : 11097809,
    "stId" : "R-SCE-6781959",
    "displayName" : "CPR6 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P53691",
    "standardIdentifier" : "uniprot:P53691",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "CPR6" ],
    "parents" : [ 11097813 ],
    "children" : [ ]
  }, {
    "dbId" : 11082960,
    "stId" : "R-SCE-69221",
    "displayName" : "CAK [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11082996 ],
    "children" : [ 11082948, 11082958, 11082953 ]
  }, {
    "dbId" : 11097811,
    "stId" : "R-SCE-6781962",
    "displayName" : "Ghost homologue of ZNF830 [nucleoplasm]",
    "schemaClass" : "GenomeEncodedEntity",
    "speciesId" : 68322,
    "parents" : [ 11097813 ],
    "children" : [ ]
  }, {
    "dbId" : 11097813,
    "stId" : "R-SCE-6781957",
    "displayName" : "XAB2 complex [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097903, 11097901, 11097908, 11097892, 11097877, 11097866, 11097858 ],
    "children" : [ 11097799, 11097794, 11097811, 11097792, 11097809, 11097804 ]
  }, {
    "dbId" : 11082964,
    "stId" : "R-SCE-67443",
    "displayName" : "ERCC2 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P06839",
    "standardIdentifier" : "uniprot:P06839",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "RAD3", "REM1", "YER171W" ],
    "parents" : [ 11082996 ],
    "children" : [ ]
  }, {
    "dbId" : 11080660,
    "stId" : "R-SCE-68439",
    "displayName" : "POL30 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P15873",
    "standardIdentifier" : "uniprot:P15873",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "POL30" ],
    "parents" : [ 11080662 ],
    "children" : [ ]
  }, {
    "dbId" : 11080662,
    "stId" : "R-SCE-68440",
    "displayName" : "PCNA homotrimer [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24712 ],
    "parents" : [ ],
    "children" : [ 11080660 ]
  }, {
    "dbId" : 11082025,
    "stId" : "R-SCE-83715",
    "displayName" : "POLR2L [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P22139",
    "standardIdentifier" : "uniprot:P22139",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "RPB10", "YOR210W" ],
    "parents" : [ 11097772, 11082060, 11083110 ],
    "children" : [ ]
  }, {
    "dbId" : 11097897,
    "stId" : "R-SCE-6790534",
    "displayName" : "Ghost homologue of (PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK) [nucleoplasm]",
    "schemaClass" : "GenomeEncodedEntity",
    "speciesId" : 68322,
    "parents" : [ 11097899 ],
    "children" : [ ]
  }, {
    "dbId" : 11080488,
    "stId" : "R-SCE-68457",
    "displayName" : "RFA2 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P26754",
    "standardIdentifier" : "uniprot:P26754",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "RFA2" ],
    "parents" : [ 11084105 ],
    "children" : [ ]
  }, {
    "dbId" : 11097899,
    "stId" : "R-SCE-6790530",
    "displayName" : "(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097903, 11097901, 11097908 ],
    "children" : [ 11080651, 11097897, 11084105 ]
  }, {
    "dbId" : 11096874,
    "stId" : "R-SCE-67437",
    "displayName" : "XPA [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P28519",
    "standardIdentifier" : "uniprot:P28519",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11097908, 11097892, 11097877, 11097866, 11097858 ],
    "children" : [ ]
  }, {
    "dbId" : 11097901,
    "stId" : "R-SCE-6782222",
    "displayName" : "TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24717 ],
    "parents" : [ ],
    "children" : [ 11097767, 11082996, 11097813, 11097772, 11097899, 6782213, 11097739, 11097787, 11084363 ]
  }, {
    "dbId" : 113541,
    "stId" : "R-ALL-113541",
    "displayName" : "PPi [nucleoplasm]",
    "schemaClass" : "SimpleEntity",
    "speciesId" : 0,
    "diagramIds" : [ 24720, 24694 ],
    "identifier" : "33019",
    "standardIdentifier" : "chebi:33019",
    "chebiIdentifier" : "chebi:33019",
    "referenceType" : "ReferenceMolecule",
    "parents" : [ ],
    "children" : [ ]
  }, {
    "dbId" : 11096879,
    "stId" : "R-SCE-3215278",
    "displayName" : "UBP15 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P50101",
    "standardIdentifier" : "uniprot:P50101",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "UBP15" ],
    "parents" : [ 11097787 ],
    "children" : [ ]
  }, {
    "dbId" : 11097903,
    "stId" : "R-SCE-6782220",
    "displayName" : "TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24719 ],
    "parents" : [ ],
    "children" : [ 11097767, 11082996, 11097813, 11097772, 6782212, 11097899, 11097739, 11097787, 11084363 ]
  }, {
    "dbId" : 11082017,
    "stId" : "R-SCE-83713",
    "displayName" : "RPB5 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P20434",
    "standardIdentifier" : "uniprot:P20434",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "RPB5", "RPA7", "RPC9", "YBR154C", "YBR1204" ],
    "parents" : [ 11097772, 11082060, 11083110 ],
    "children" : [ ]
  }, {
    "dbId" : 11080481,
    "stId" : "R-SCE-68459",
    "displayName" : "Ghost homologue of RPA3 [nucleoplasm]",
    "schemaClass" : "GenomeEncodedEntity",
    "speciesId" : 68322,
    "parents" : [ 11084105 ],
    "children" : [ ]
  }, {
    "dbId" : 11097888,
    "stId" : "R-SCE-109943",
    "displayName" : "ERCC1:ERCC4 [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097908, 11097892, 11097890 ],
    "children" : [ 11097886, 11097881 ]
  }, {
    "dbId" : 11097890,
    "stId" : "R-SCE-6782142",
    "displayName" : "TC-NER incision complex [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24709 ],
    "parents" : [ ],
    "children" : [ 11097879, 11097888 ]
  }, {
    "dbId" : 11082021,
    "stId" : "R-SCE-83714",
    "displayName" : "RPO26 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P20435",
    "standardIdentifier" : "uniprot:P20435",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "RPO26", "RPB6", "YPR187W", "P9677.8" ],
    "parents" : [ 11097772, 11082060, 11083110 ],
    "children" : [ ]
  }, {
    "dbId" : 11097892,
    "stId" : "R-SCE-6782205",
    "displayName" : "TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA  [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24710 ],
    "parents" : [ ],
    "children" : [ 11097767, 6782202, 11082996, 11097813, 11097888, 11097772, 11096874, 11096858, 11097739, 11097787, 11084363, 11084105 ]
  }, {
    "dbId" : 113550,
    "stId" : "R-ALL-113550",
    "displayName" : "Pi [nucleoplasm]",
    "schemaClass" : "SimpleEntity",
    "speciesId" : 0,
    "diagramIds" : [ 24706 ],
    "identifier" : "43474",
    "standardIdentifier" : "chebi:43474",
    "referenceType" : "ReferenceMolecule",
    "parents" : [ ],
    "children" : [ ]
  }, {
    "dbId" : 6782202,
    "stId" : "R-ALL-6782202",
    "displayName" : "5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm]",
    "schemaClass" : "OtherEntity",
    "speciesId" : 0,
    "parents" : [ 11097908, 11097892 ],
    "children" : [ ]
  }, {
    "dbId" : 11097908,
    "stId" : "R-SCE-6782219",
    "displayName" : "TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24715 ],
    "parents" : [ ],
    "children" : [ 11097767, 11082996, 6782202, 11097813, 11097888, 11097772, 11096874, 11096858, 11097787, 11084363, 11097739, 11097899 ]
  }, {
    "dbId" : 11097864,
    "stId" : "R-SCE-9684121",
    "displayName" : "Ubiquitinated,hyperphosphorylated RNA Pol II:Partially open bubble damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097866 ],
    "children" : [ 11097862, 11097767 ]
  }, {
    "dbId" : 11081995,
    "stId" : "R-SCE-63508",
    "displayName" : "RPB4 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P20433",
    "standardIdentifier" : "uniprot:P20433",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "RPB4" ],
    "parents" : [ 11097772, 11082060, 11083110 ],
    "children" : [ ]
  }, {
    "dbId" : 11080459,
    "stId" : "R-SCE-8866684",
    "displayName" : "DPB3 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P27344",
    "standardIdentifier" : "uniprot:P27344",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "DPB3" ],
    "parents" : [ 11080466 ],
    "children" : [ ]
  }, {
    "dbId" : 11097866,
    "stId" : "R-SCE-9684117",
    "displayName" : "TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24705 ],
    "parents" : [ ],
    "children" : [ 11097813, 11096874, 11084363, 11097787, 11097864 ]
  }, {
    "dbId" : 11097871,
    "stId" : "R-SCE-6782116",
    "displayName" : "Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097873 ],
    "children" : [ 11082996, 6782110, 11097772 ]
  }, {
    "dbId" : 11081985,
    "stId" : "R-SCE-63525",
    "displayName" : "POLR2I [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P27999",
    "standardIdentifier" : "uniprot:P27999",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11097772, 11082060, 11083110 ],
    "children" : [ ]
  }, {
    "dbId" : 11080449,
    "stId" : "R-SCE-68482",
    "displayName" : "DPB2 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P24482",
    "standardIdentifier" : "uniprot:P24482",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "DPB2" ],
    "parents" : [ 11080468 ],
    "children" : [ ]
  }, {
    "dbId" : 11097856,
    "stId" : "R-SCE-6782068",
    "displayName" : "Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097858 ],
    "children" : [ 11097767, 11097854 ]
  }, {
    "dbId" : 11097858,
    "stId" : "R-SCE-6782066",
    "displayName" : "TC-NER pre-incision complex [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24704 ],
    "parents" : [ ],
    "children" : [ 11097813, 11097856, 11096874, 11084363, 11097787 ]
  }, {
    "dbId" : 11097860,
    "stId" : "R-SCE-9684119",
    "displayName" : "Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097862 ],
    "children" : [ 11082996, 9684123, 11097772 ]
  }, {
    "dbId" : 29358,
    "stId" : "R-ALL-29358",
    "displayName" : "ATP [nucleoplasm]",
    "schemaClass" : "SimpleEntity",
    "speciesId" : 0,
    "diagramIds" : [ 24722, 24703 ],
    "identifier" : "30616",
    "standardIdentifier" : "chebi:30616",
    "referenceType" : "ReferenceMolecule",
    "parents" : [ ],
    "children" : [ ]
  }, {
    "dbId" : 11081990,
    "stId" : "R-SCE-63504",
    "displayName" : "POLR2B [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P08518",
    "standardIdentifier" : "uniprot:P08518",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11097772, 11082060, 11083110 ],
    "children" : [ ]
  }, {
    "dbId" : 11097862,
    "stId" : "R-SCE-9684120",
    "displayName" : "Ubiquitinated,hyperphosphorylated RNA Pol II:Partially open bubble damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097864 ],
    "children" : [ 11097860, 11097739 ]
  }, {
    "dbId" : 113582,
    "stId" : "R-ALL-113582",
    "displayName" : "ADP [nucleoplasm]",
    "schemaClass" : "SimpleEntity",
    "speciesId" : 0,
    "diagramIds" : [ 24707 ],
    "identifier" : "456216",
    "standardIdentifier" : "chebi:456216",
    "referenceType" : "ReferenceMolecule",
    "parents" : [ ],
    "children" : [ ]
  }, {
    "dbId" : 11080454,
    "stId" : "R-SCE-8866685",
    "displayName" : "DPB4 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "Q04603",
    "standardIdentifier" : "uniprot:Q04603",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "DPB4" ],
    "parents" : [ 11080468 ],
    "children" : [ ]
  }, {
    "dbId" : 11082009,
    "stId" : "R-SCE-63523",
    "displayName" : "RPB8 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P20436",
    "standardIdentifier" : "uniprot:P20436",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "RPB8", "YOR224C", "YOR50-14" ],
    "parents" : [ 11097772, 11082060, 11083110 ],
    "children" : [ ]
  }, {
    "dbId" : 11097881,
    "stId" : "R-SCE-54427",
    "displayName" : "Ghost homologue of ERCC1 [nucleoplasm]",
    "schemaClass" : "GenomeEncodedEntity",
    "speciesId" : 68322,
    "parents" : [ 11097888 ],
    "children" : [ ]
  }, {
    "dbId" : 11096858,
    "stId" : "R-SCE-67447",
    "displayName" : "ERCC5 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P07276",
    "standardIdentifier" : "uniprot:P07276",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11097908, 11097892, 11097879 ],
    "children" : [ ]
  }, {
    "dbId" : 11082013,
    "stId" : "R-SCE-63537",
    "displayName" : "POLR2K [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P40422",
    "standardIdentifier" : "uniprot:P40422",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "RPC10", "RPB12", "YHR143W-A", "YHR143BW" ],
    "parents" : [ 11097772, 11082060, 11083110 ],
    "children" : [ ]
  }, {
    "dbId" : 11080479,
    "stId" : "R-SCE-68461",
    "displayName" : "Ghost homologue of RPA1 [nucleoplasm]",
    "schemaClass" : "GenomeEncodedEntity",
    "speciesId" : 68322,
    "parents" : [ 11084105 ],
    "children" : [ ]
  }, {
    "dbId" : 11097886,
    "stId" : "R-SCE-67445",
    "displayName" : "RAD1 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P06777",
    "standardIdentifier" : "uniprot:P06777",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "RAD1" ],
    "parents" : [ 11097888 ],
    "children" : [ ]
  }, {
    "dbId" : 11097873,
    "stId" : "R-SCE-6782112",
    "displayName" : "Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6 [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097875 ],
    "children" : [ 11097871, 11097739 ]
  }, {
    "dbId" : 11082000,
    "stId" : "R-SCE-63517",
    "displayName" : "RPB7 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P34087",
    "standardIdentifier" : "uniprot:P34087",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "RPB7" ],
    "parents" : [ 11097772, 11082060, 11083110 ],
    "children" : [ ]
  }, {
    "dbId" : 11080464,
    "stId" : "R-SCE-8866684-2",
    "displayName" : "DLS1 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P40366",
    "standardIdentifier" : "uniprot:P40366",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "DLS1" ],
    "parents" : [ 11080466 ],
    "children" : [ ]
  }, {
    "dbId" : 11097875,
    "stId" : "R-SCE-6782122",
    "displayName" : "Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH:ERCC6:ERCC8:DDB1:CUL4:RBX1 [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097877 ],
    "children" : [ 11097767, 11097873 ]
  }, {
    "dbId" : 11096082,
    "stId" : "R-SCE-5651800",
    "displayName" : "POLD,POLE [nucleoplasm]",
    "schemaClass" : "CandidateSet",
    "speciesId" : 68322,
    "diagramIds" : [ 24714 ],
    "parents" : [ ],
    "children" : [ 11080468 ]
  }, {
    "dbId" : 11080466,
    "stId" : "R-SCE-8866684-3",
    "displayName" : "Homologues of POLE4 [nucleoplasm]",
    "schemaClass" : "DefinedSet",
    "speciesId" : 68322,
    "parents" : [ 11080468 ],
    "children" : [ 11080464, 11080459 ]
  }, {
    "dbId" : 11082005,
    "stId" : "R-SCE-63506",
    "displayName" : "POLR2C [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P16370",
    "standardIdentifier" : "uniprot:P16370",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11097772, 11082060, 11083110 ],
    "children" : [ ]
  }, {
    "dbId" : 11097877,
    "stId" : "R-SCE-6782111",
    "displayName" : "TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24723 ],
    "parents" : [ 11097879 ],
    "children" : [ 11097813, 11097875, 11096874, 11084363, 11097787 ]
  }, {
    "dbId" : 11080468,
    "stId" : "R-SCE-68483",
    "displayName" : "DNA polymerase epsilon [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11096082 ],
    "children" : [ 11080454, 11080466, 11080449, 11080444 ]
  }, {
    "dbId" : 11097879,
    "stId" : "R-SCE-6782134",
    "displayName" : "TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097890 ],
    "children" : [ 11097877, 11096858, 11084105 ]
  }, {
    "dbId" : 11083108,
    "stId" : "R-SCE-63502",
    "displayName" : "POLR2A [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P04050",
    "standardIdentifier" : "uniprot:P04050",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11083110 ],
    "children" : [ ]
  }, {
    "dbId" : 11083110,
    "stId" : "R-SCE-113401",
    "displayName" : "RNA Polymerase II holoenzyme complex (unphosphorylated) [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24698 ],
    "parents" : [ ],
    "children" : [ 11081990, 11083108, 11082021, 11082005, 11082000, 11082017, 11081985, 11081980, 11082013, 11081995, 11082025, 11082009 ]
  }, {
    "dbId" : 110291,
    "stId" : "R-ALL-110291",
    "displayName" : "damaged DNA substrate:nascent mRNA hybrid [nucleoplasm]",
    "schemaClass" : "OtherEntity",
    "speciesId" : 0,
    "parents" : [ 11097774, 11097731 ],
    "children" : [ ]
  }, {
    "dbId" : 11097727,
    "stId" : "R-SCE-6781821",
    "displayName" : "Damaged dsDNA with open transcription bubble:Hyperphosphorylated RNA Pol II:TFIIH [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "diagramIds" : [ 24692 ],
    "parents" : [ ],
    "children" : [ 11082996, 6781820, 11082060 ]
  }, {
    "dbId" : 11084361,
    "stId" : "R-SCE-65748-2",
    "displayName" : "BYE1 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P36106",
    "standardIdentifier" : "uniprot:P36106",
    "referenceType" : "ReferenceGeneProduct",
    "geneNames" : [ "BYE1" ],
    "parents" : [ 11084363 ],
    "children" : [ ]
  }, {
    "dbId" : 11084105,
    "stId" : "R-SCE-68462",
    "displayName" : "RPA heterotrimer [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097892, 11097879, 11097899 ],
    "children" : [ 11080481, 11080479, 11080488 ]
  }, {
    "dbId" : 11084363,
    "stId" : "R-SCE-65748-3",
    "displayName" : "Homologues of TCEA1 [nucleoplasm]",
    "schemaClass" : "DefinedSet",
    "speciesId" : 68322,
    "parents" : [ 11097903, 11097901, 11097908, 11097892, 11097877, 11097866, 11097858 ],
    "children" : [ 11084356, 11084361 ]
  }, {
    "dbId" : 6781829,
    "stId" : "R-ALL-6781829",
    "displayName" : "ribonucleoside triphosphate [nucleoplasm]",
    "schemaClass" : "SimpleEntity",
    "speciesId" : 0,
    "diagramIds" : [ 24691 ],
    "identifier" : "17972",
    "standardIdentifier" : "chebi:17972",
    "referenceType" : "ReferenceMolecule",
    "parents" : [ ],
    "children" : [ ]
  }, {
    "dbId" : 11082058,
    "stId" : "R-SCE-113420",
    "displayName" : "phospho-p-S2,S5(CTD)-POLR2A [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P04050",
    "standardIdentifier" : "uniprot:P04050",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11082060 ],
    "children" : [ ]
  }, {
    "dbId" : 11082060,
    "stId" : "R-SCE-109909",
    "displayName" : "RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm]",
    "schemaClass" : "Complex",
    "speciesId" : 68322,
    "parents" : [ 11097731, 11097727 ],
    "children" : [ 11081990, 11082005, 11082021, 11082000, 11082017, 11081985, 11081980, 11082013, 11082058, 11081995, 11082009, 11082025 ]
  }, {
    "dbId" : 11084110,
    "stId" : "R-SCE-68524",
    "displayName" : "Ghost homologue of Ub [nucleoplasm]",
    "schemaClass" : "GenomeEncodedEntity",
    "speciesId" : 68322,
    "parents" : [ 11097772 ],
    "children" : [ ]
  }, {
    "dbId" : 11084356,
    "stId" : "R-SCE-65748",
    "displayName" : "TCEA1 [nucleoplasm]",
    "schemaClass" : "EntityWithAccessionedSequence",
    "speciesId" : 68322,
    "identifier" : "P07273",
    "standardIdentifier" : "uniprot:P07273",
    "referenceType" : "ReferenceGeneProduct",
    "parents" : [ 11084363 ],
    "children" : [ ]
  }, {
    "dbId" : 6782110,
    "stId" : "R-ALL-6782110",
    "displayName" : "Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm]",
    "schemaClass" : "OtherEntity",
    "speciesId" : 0,
    "parents" : [ 11097871 ],
    "children" : [ ]
  } ],
  "edges" : [ {
    "dbId" : 11097869,
    "stId" : "R-SCE-6782131",
    "displayName" : "ERCC2-facilitated RNA Pol II backtracking in TC-NER",
    "schemaClass" : "Reaction",
    "speciesId" : 0,
    "following" : [ 11104918 ],
    "inputs" : [ 29358, 11097858 ],
    "outputs" : [ 113550, 113582, 11097866 ],
    "catalysts" : [ 11097858 ],
    "efs" : [ ],
    "diagramIds" : [ 24702 ],
    "entityFunctionalStatus" : [ ]
  }, {
    "dbId" : 11097743,
    "stId" : "R-SCE-6781840",
    "displayName" : "ERCC6 binds stalled RNA Pol II",
    "schemaClass" : "Reaction",
    "speciesId" : 0,
    "preceding" : [ 11097734 ],
    "inputs" : [ 11097731, 11097739 ],
    "outputs" : [ 11097741 ],
    "efs" : [ ],
    "diagramIds" : [ 24699 ],
    "entityFunctionalStatus" : [ ]
  }, {
    "dbId" : 11097729,
    "stId" : "R-SCE-6781818",
    "displayName" : "RNA Pol II initiates transcription from damaged DNA template",
    "schemaClass" : "BlackBoxEvent",
    "speciesId" : 0,
    "following" : [ 11097734 ],
    "inputs" : [ 11083110, 11082996, 5688114 ],
    "outputs" : [ 11097727 ],
    "efs" : [ ],
    "diagramIds" : [ 24695 ],
    "entityFunctionalStatus" : [ ]
  }, {
    "dbId" : 11097906,
    "stId" : "R-SCE-6782208",
    "displayName" : "Repair DNA synthesis of ~27-30 bases long patch by POLD, POLE or POLK in TC-NER",
    "schemaClass" : "Reaction",
    "speciesId" : 0,
    "inputs" : [ 30555, 11097901 ],
    "outputs" : [ 11097903, 113541 ],
    "catalysts" : [ 11097901 ],
    "efs" : [ ],
    "diagramIds" : [ 24716 ],
    "entityFunctionalStatus" : [ ]
  }, {
    "dbId" : 11097895,
    "stId" : "R-SCE-6782204",
    "displayName" : "5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER",
    "schemaClass" : "Reaction",
    "speciesId" : 0,
    "following" : [ 11097910 ],
    "inputs" : [ 11097890 ],
    "outputs" : [ 11097892 ],
    "catalysts" : [ 11097890 ],
    "efs" : [ ],
    "diagramIds" : [ 24708 ],
    "entityFunctionalStatus" : [ ]
  }, {
    "dbId" : 11104918,
    "stId" : "R-SCE-9684118",
    "displayName" : "ERCC3-facilitated RNA Pol II backtracking in TC-NER",
    "schemaClass" : "Reaction",
    "speciesId" : 0,
    "preceding" : [ 11097869 ],
    "inputs" : [ 29358, 11097866 ],
    "outputs" : [ 113550, 113582, 11097877 ],
    "catalysts" : [ 11097866 ],
    "efs" : [ ],
    "diagramIds" : [ 24721 ],
    "entityFunctionalStatus" : [ ]
  }, {
    "dbId" : 11097910,
    "stId" : "R-SCE-6782211",
    "displayName" : "DNA polymerases delta, epsilon or kappa bind the TC-NER site",
    "schemaClass" : "Reaction",
    "speciesId" : 0,
    "preceding" : [ 11097895 ],
    "inputs" : [ 11080662, 11097892, 11096082, 11080651 ],
    "outputs" : [ 11097908 ],
    "efs" : [ ],
    "diagramIds" : [ 24711 ],
    "entityFunctionalStatus" : [ ]
  }, {
    "dbId" : 11097734,
    "stId" : "R-SCE-6781824",
    "displayName" : "Active RNA Pol II complex transcribes lesion-containing DNA template",
    "schemaClass" : "BlackBoxEvent",
    "speciesId" : 0,
    "preceding" : [ 11097729 ],
    "following" : [ 11097743 ],
    "inputs" : [ 11097727, 6781829 ],
    "outputs" : [ 11097731, 113541 ],
    "catalysts" : [ 11097727 ],
    "efs" : [ ],
    "diagramIds" : [ 24690 ],
    "entityFunctionalStatus" : [ ]
  } ],
  "subpathways" : [ {
    "dbId" : 11107972,
    "stId" : "R-SCE-6781827",
    "displayName" : "Transcription-Coupled Nucleotide Excision Repair (TC-NER)",
    "events" : [ 11097869, 11097895, 11104918, 11097910, 11097906, 11097743, 11097729, 11097734 ]
  }, {
    "dbId" : 11107978,
    "stId" : "R-SCE-6782135",
    "displayName" : "Dual incision in TC-NER",
    "events" : [ 11097869, 11097895, 11104918, 11097910 ]
  }, {
    "dbId" : 11107980,
    "stId" : "R-SCE-6782210",
    "displayName" : "Gap-filling DNA repair synthesis and ligation in TC-NER",
    "events" : [ 11097906 ]
  }, {
    "dbId" : 11107970,
    "stId" : "R-SCE-6781823",
    "displayName" : "Formation of TC-NER Pre-Incision Complex",
    "events" : [ 11097743, 11097729, 11097734 ]
  } ]
}