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Go!
Schema
>
Complex
>
Entries
TFIIH [nucleoplasm]
Show undefined attributes
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catalystActivities
[CatalystActivity:10490889] 3'-5' DNA helicase activity of TFIIH [nucleoplasm]
compartment
[Compartment:7660] nucleoplasm
componentOf
[Complex:R-XTR-5689862] Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:TFIIH:PAR-PARP1,PAR-PARP2 [nucleoplasm] - Xenopus tropicalis
[Complex:R-XTR-9684119] Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm] - Xenopus tropicalis
[Complex:R-XTR-73716] RNA Polymerase I Transcription Initiation complex [nucleoplasm] - Xenopus tropicalis
[Complex:R-XTR-77061] CE:Pol II CTD:Spt5 complex [nucleoplasm] - Xenopus tropicalis
[Complex:R-XTR-6797611] Elongation Complex at DNA Repair Genes [nucleoplasm] - Xenopus tropicalis
[Complex:R-XTR-6782222] TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] - Xenopus tropicalis
[Complex:R-XTR-75878] pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] - Xenopus tropicalis
[Complex:R-XTR-6782219] TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] - Xenopus tropicalis
[Complex:R-XTR-6782205] TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] - Xenopus tropicalis
consumedByEvent
[Reaction:R-XTR-5691000] TFIIH binds GG-NER site to form a verification complex - Xenopus tropicalis
[Reaction:R-XTR-109639] Formation of the closed pre-initiation complex - Xenopus tropicalis
[BlackBoxEvent:R-XTR-6781818] RNA Pol II initiates transcription from damaged DNA template - Xenopus tropicalis
[Reaction:R-XTR-112379] Recruitment of elongation factors to form elongation complex - Xenopus tropicalis
created
[InstanceEdit:10486564] Wright, Adam, 2024-03-07
dbId
10489561
displayName
TFIIH [nucleoplasm]
hasComponent
[Complex:R-XTR-69221] CAK [nucleoplasm]
[EntityWithAccessionedSequence:R-XTR-67443] ercc2 [nucleoplasm]
[EntityWithAccessionedSequence:R-XTR-67439] ercc3 [nucleoplasm]
[GenomeEncodedEntity:R-XTR-65916] Ghost homologue of GTF2H3 [nucleoplasm]
[EntityWithAccessionedSequence:R-XTR-65912] gtf2h1 [nucleoplasm]
[EntityWithAccessionedSequence:R-XTR-65914] gtf2h2 [nucleoplasm]
[EntityWithAccessionedSequence:R-XTR-65918] gtf2h4 [nucleoplasm]
[EntityWithAccessionedSequence:R-XTR-5688446] gtf2h5 [nucleoplasm]
inDisease
false
inferredFrom
[Complex:R-HSA-109634] TFIIH [nucleoplasm] - Homo sapiens
name
TFIIH
producedByEvent
[Reaction:R-XTR-112385] Addition of nucleotides leads to transcript elongation - Xenopus tropicalis
[Reaction:R-XTR-75891] Abortive Initiation After Second Transition - Xenopus tropicalis
schemaClass
Complex
species
[Species:205621] Xenopus tropicalis
stId
R-XTR-109634
summation
[Summation:9864367] This complex/polymer has been computationally inferred (based on PANTHER) from a complex/polymer involved in an event that has been demonstrated in another species.
Referrals
(hasComponent)
[Complex:R-XTR-73716] RNA Polymerase I Transcription Initiation complex [nucleoplasm]
[Complex:R-XTR-6797611] Elongation Complex at DNA Repair Genes [nucleoplasm]
[Complex:R-XTR-6797607] CDK12-Phosphorylated Elongation Complex [nucleoplasm]
[Complex:R-XTR-6781861] Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm]
[Complex:R-XTR-9684119] Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm]
[Complex:R-XTR-6781822] Hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm]
[Complex:R-XTR-6781821] Damaged dsDNA with open transcription bubble:Hyperphosphorylated RNA Pol II:TFIIH [nucleoplasm]
[Complex:R-XTR-6782205] TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm]
[Complex:R-XTR-6782219] TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm]
[Complex:R-XTR-6782116] Ubiquitinated,hyperphosphorylated RNA Pol II:Open bubble damaged DNA template:nascent mRNA hybrid:TFIIH [nucleoplasm]
[Complex:R-XTR-6782222] TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm]
[Complex:R-XTR-6782220] TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm]
[Complex:R-XTR-6782230] TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm]
[Complex:R-XTR-5689862] Ub:XPC:RAD23:CETN2:Distorted dsDNA:PAR-UV-DDB:TFIIH:PAR-PARP1,PAR-PARP2 [nucleoplasm]
[Complex:R-XTR-77061] CE:Pol II CTD:Spt5 complex [nucleoplasm]
[Complex:R-XTR-77053] RNA Pol II with phosphorylated CTD: CE complex [nucleoplasm]
[Complex:R-XTR-157174] Pol II transcription complex with (ser5) phosphorylated CTD containing extruded transcript to +30 [nucleoplasm]
[Complex:R-XTR-157171] Pol II transcription complex containing extruded transcript to +30 [nucleoplasm]
[Complex:R-XTR-75902] pol II transcription complex containing 11 nucleotide long transcript [nucleoplasm]
[Complex:R-XTR-75882] pol II transcription complex containing 9 nucleotide long transcript [nucleoplasm]
[Complex:R-XTR-75881] pol II transcription complex containing 4 nucleotide long transcript [nucleoplasm]
[Complex:R-XTR-75878] pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm]
[Complex:R-XTR-109878] pol II transcription complex [nucleoplasm]
[Complex:R-XTR-83601] Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm]
[Complex:R-XTR-83591] RNA Polymearse II:NTP:TFIIF complex [nucleoplasm]
[Complex:R-XTR-109876] pol II open pre-initiation complex [nucleoplasm]
[Complex:R-XTR-109635] pol II closed pre-initiation complex [nucleoplasm]
[Complex:R-XTR-112433] Elongation complex [nucleoplasm]
[Complex:R-XTR-75859] Pol II Promoter Escape Complex [nucleoplasm]
[Complex:R-XTR-75890] pol II transcription complex containing 4-9 nucleotide long transcript [nucleoplasm]
[Complex:R-XTR-73717] RNA Polymerase I promoter escape complex [nucleoplasm]
(input)
[BlackBoxEvent:R-XTR-6781818] RNA Pol II initiates transcription from damaged DNA template
[Reaction:R-XTR-5691000] TFIIH binds GG-NER site to form a verification complex
[Reaction:R-XTR-109639] Formation of the closed pre-initiation complex
[Reaction:R-XTR-112379] Recruitment of elongation factors to form elongation complex
(output)
[Reaction:R-XTR-112385] Addition of nucleotides leads to transcript elongation
[Reaction:R-XTR-75891] Abortive Initiation After Second Transition
(inferredTo)
[Complex:R-HSA-109634] TFIIH [nucleoplasm]
(physicalEntity)
[CatalystActivity:10490889] 3'-5' DNA helicase activity of TFIIH [nucleoplasm]
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