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Schema
>
BlackBoxEvent
>
Entries
HOXA1 gene is transcribed
Show undefined attributes
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authored
[InstanceEdit:5617432] May, Bruce, 2014-08-07
[InstanceEdit:6810137] Rezsohazy, René, 2015-11-15
category
omitted
compartment
[Compartment:7660] nucleoplasm
[Compartment:70101] cytosol
created
[InstanceEdit:5617463] May, Bruce, 2014-08-08
dbId
5617471
displayName
HOXA1 gene is transcribed
edited
[InstanceEdit:5617432] May, Bruce, 2014-08-07
eventOf
[Pathway:R-HSA-5617472] Activation of anterior HOX genes in hindbrain development during early embryogenesis - Homo sapiens
followingEvent
[BlackBoxEvent:R-HSA-5617458] HOXA1 mRNA is translated - Homo sapiens
inferredFrom
[BlackBoxEvent:R-MMU-5617999] Hoxa1 gene is transcribed - Mus musculus
input
[EntityWithAccessionedSequence:R-HSA-5617426] HOXA1 gene [nucleoplasm]
isChimeric
false
isInDisease
false
isInferred
true
literatureReference
[LiteratureReference:5621756] MicroRNA-99 family members suppress Homeobox A1 expression in epithelial cells
[LiteratureReference:5621740] Let-7c inhibits NSCLC cell proliferation by targeting HOXA1
[LiteratureReference:5621708] MicroRNA fingerprints during human megakaryocytopoiesis
[LiteratureReference:5618006] Retinoic acid induces three newly cloned HOXA1 transcripts in MCF7 breast cancer cells
[LiteratureReference:5620950] Noncoding RNA synthesis and loss of Polycomb group repression accompanies the colinear activation of the human HOXA cluster
[LiteratureReference:5624425] CTCF Controls HOXA Cluster Silencing and Mediates PRC2-Repressive Higher-Order Chromatin Structure in NT2/D1 Cells
[LiteratureReference:5687971] miR-100 induces epithelial-mesenchymal transition but suppresses tumorigenesis, migration and invasion
[LiteratureReference:5687913] The truncated Hoxa1 protein interacts with Hoxa1 and Pbx1 in stem cells
[LiteratureReference:6810179] Hypoxia-inducible mir-210 regulates normoxic gene expression involved in tumor initiation
modified
[InstanceEdit:9830342] Matthews, Lisa, 2023-03-08
name
HOXA1 gene is transcribed
output
[EntityWithAccessionedSequence:R-HSA-5617439] HOXA1 mRNA [cytosol]
precedingEvent
[BlackBoxEvent:R-HSA-5617431] Retinoic acid activates HOXA1 chromatin - Homo sapiens
regulatedBy
[PositiveGeneExpressionRegulation:R-HSA-5634074] Positive gene expression regulation by 'atRA:RARA,G:RXRA at active HOXA1 chromatin [nucleoplasm]'
[PositiveGeneExpressionRegulation:R-HSA-6810146] Positive gene expression regulation by 'CNOT6:ZNF335 [nucleoplasm]'
[PositiveGeneExpressionRegulation:R-HSA-6810148] Positive gene expression regulation by 'RQCD1 [nucleoplasm]'
regulationReference
[RegulationReference:9641972] Positive gene expression regulation by 'atRA:RARA,G:RXRA at active HOXA1 chromatin [nucleoplasm]' Evolutionary-conserved enhancers direct region-specific expression of the murine Hoxa-1 and Hoxa-2 loci in both mice and Drosophila
[RegulationReference:9642672] Positive gene expression regulation by 'RQCD1 [nucleoplasm]' Components of the CCR4-NOT complex function as nuclear hormone receptor coactivators via association with the NRC-interacting Factor NIF-1
[RegulationReference:9642745] Positive gene expression regulation by 'CNOT6:ZNF335 [nucleoplasm]' Components of the CCR4-NOT complex function as nuclear hormone receptor coactivators via association with the NRC-interacting Factor NIF-1
releaseDate
2015-12-15
reviewStatus
[ReviewStatus:9821382] five stars
reviewed
[InstanceEdit:5693642] Blasi, F, 2015-05-13
schemaClass
BlackBoxEvent
species
[Species:48887] Homo sapiens
stId
R-HSA-5617471
summation
[Summation:5619510] After activation by retinoic acid, the HOXA1 gene is transcr...
[Summation:6810087] CNOT6 (CCR4) and ZNF335 (NIF-1) directly associate and indir...
[Summation:5687965] Regulation of HOXA1 by retinoic acid is inferred from mouse ...
[Summation:6810094] RQCD1 (RCD1) enhances transcription of the HOXA1 in response...
Referrals
(hasEvent)
[Pathway:R-HSA-5617472] Activation of anterior HOX genes in hindbrain development during early embryogenesis
(precedingEvent)
[BlackBoxEvent:R-HSA-5617458] HOXA1 mRNA is translated
(inferredTo)
[BlackBoxEvent:R-MMU-5617999] Hoxa1 gene is transcribed
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