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smg6 [cytosol]
Stable Identifier
R-XTR-927851
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
cytosol
Synonyms
SMG6, A0A7D9NM60
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Xenopus tropicalis)
Nonsense-Mediated Decay (NMD) (Xenopus tropicalis)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Xenopus tropicalis)
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Xenopus tropicalis)
mRNA Cleaved by SMG6 [cytosol] (Xenopus tropicalis)
smg6 [cytosol] (Xenopus tropicalis)
smg6 [cytosol] (Xenopus tropicalis)
SMG6 hydrolyzes mRNA with premature termination codon (Xenopus tropicalis)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Xenopus tropicalis)
smg6 [cytosol] (Xenopus tropicalis)
mRNA Cleaved by SMG6 [cytosol] (Xenopus tropicalis)
smg6 [cytosol] (Xenopus tropicalis)
smg6 [cytosol] (Xenopus tropicalis)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Xenopus tropicalis)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Xenopus tropicalis)
smg6 [cytosol] (Xenopus tropicalis)
smg6 [cytosol] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:A0A7D9NM60
Gene Names
smg6
Reference Genes
BioGPS Gene:100380118 smg6
ENSEMBL:ENSXETG00000023799
KEGG Gene (Xenopus tropicalis):100380118 smg6
Monarch:100380118 smg6
NCBI Gene:100380118 smg6
Reference Transcript
RefSeq:XM_012957457.3 smg6
Other Identifiers
100380118
GO:0000184
GO:0000781
GO:0003824
GO:0004519
GO:0005634
GO:0005694
GO:0005730
GO:0005737
GO:0005829
GO:0016071
GO:0016787
GO:0030145
GO:0043226
GO:0046872
Participates
as an output of
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Xenopus tropicalis)
as an input of
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Xenopus tropicalis)
as a component of
mRNA Cleaved by SMG6 [cytosol] (Xenopus tropicalis)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Xenopus tropicalis)
Inferred From
SMG6 [cytosol]
(Homo sapiens)
Cross References
RefSeq
XP_012812911.1
Xenbase
XB-GENE-5817473
Ensembl
ENSXETP00000051324
,
ENSXETG00000023799
,
ENSXETT00000051324
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