Reactome | LOC100497990 [extracellular region]

LOC100497990 [extracellular region]

Stable Identifier

R-XTR-2470162

Type

Protein [EntityWithAccessionedSequence]

Species

Xenopus tropicalis

Compartment

extracellular region

Synonyms

3,4-Hyp 5-Gal-Hyl collagen alpha-3(V) chain C-term fragment, A0A803J8Y6

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:A0A803J8Y6

Gene Names

LOC100497990

Reference Genes

BioGPS Gene:100497990 LOC100497990

ENSEMBL:ENSXETG00000011757

Monarch:100497990 LOC100497990

NCBI Gene:100497990 LOC100497990

UCSC:A0A803J8Y6 LOC100497990

Reference Transcript

RefSeq:XM_012953005.3 LOC100497990

Other Identifiers

100497990

GO:0005198

GO:0005201

Participates

as a component of

Other forms of this molecule

LOC100497990 [endoplasmic reticulum lumen]

LOC100497990 [extracellular region]

LOC100497990 [endoplasmic reticulum lumen]

Inferred From

Alpha-3(V) -N propeptides [extracellular region] (Homo sapiens)

3x4Hyp-3Hyp-GalHyl-COL5A3(?-1745) [extracellular region] (Homo sapiens)

3,4-Hyp 5-Gal-Hyl collagen alpha-3(V) chain C-term fragment [extracellular region] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

O5-galactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-galactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.

Cross References

RefSeq

XP_012808459.1

ENSEMBL

ENSXETT00000110591, ENSXETG00000011757, ENSXETP00000104288

Xenbase

XB-GENE-29083971

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