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col1a1 [extracellular region]
Stable Identifier
R-XTR-2396440
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
extracellular region
Synonyms
Lysyl-pyrrolyl 3,4-Hyp 5-Hyl collagen alpha-1(I) chain, Q640B2
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Xenopus tropicalis)
Collagen formation (Xenopus tropicalis)
Assembly of collagen fibrils and other multimeric structures (Xenopus tropicalis)
Crosslinking of collagen fibrils (Xenopus tropicalis)
Formation of lysyl-pyrrole cross-links (Xenopus tropicalis)
Collagen type I fibrils with lysyl-pyrrole cross-links [extracellular region] (Xenopus tropicalis)
Collagen type I fibril with lysyl-pyrrole cross-links [extracellular region] (Xenopus tropicalis)
Tropocollagen type I with or without L-Pyrrole [extracellular region] (Xenopus tropicalis)
Tropocollagen type I with L-Pyrrole [extracellular region] (Xenopus tropicalis)
col1a1 [extracellular region] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:Q640B2
Gene Names
col1a1
Reference Genes
BioGPS Gene:496414 col1a1
ENSEMBL:ENSXETG00000003374
KEGG:xtr:496414 col1a1
Monarch:496414 col1a1
NCBI Gene:496414 col1a1
UCSC:Q640B2 col1a1
Reference Transcript
RefSeq:NM_001011005.1 col1a1
Participates
as a component of
Tropocollagen type I with L-Pyrrole [extracellular region] (Xenopus tropicalis)
Other forms of this molecule
col1a1 [endoplasmic reticulum lumen]
col1a1 [endoplasmic reticulum lumen]
col1a1 [endoplasmic reticulum lumen]
col1a1 [endoplasmic reticulum lumen]
col1a1 [endoplasmic reticulum lumen]
col1a1 [endoplasmic reticulum lumen]
col1a1 [endoplasmic reticulum lumen]
col1a1 [endoplasmic reticulum lumen]
col1a1 [endoplasmic reticulum lumen]
col1a1 [endoplasmic reticulum lumen]
col1a1 [endoplasmic reticulum lumen]
col1a1 [endoplasmic reticulum lumen]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
col1a1 [extracellular region]
Inferred From
Lysyl-pyrrolyl collagen alpha-1(I) chains [extracellular region]
(Homo sapiens)
Lysyl-pyrrolyl 3,4-Hyp 5-Hyl collagen alpha-1(I) chain [extracellular region]
(Homo sapiens)
Modified Residues
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,3S)-3-hydroxyproline at unknown position
PsiMod Name
(2S,3S)-3-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.
Name
(2S,5R)-5-hydroxylysine at unknown position
PsiMod Name
(2S,5R)-5-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.
Name
(2S,5R)-5-hydroxylysine (lysyl-pyrrole cross-link) at unknown position
Modification
lysyl-pyrrole cross-link
PsiMod Name
(2S,5R)-5-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.
Cross References
RefSeq
NP_001011005.1
Xenbase
XB-GENE-6258379
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