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sdc2 [Golgi lumen]
Stable Identifier
R-XTR-2076588
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
Golgi lumen
Synonyms
HS(6)-SDC2, Q28HM3
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Heparan sulfate/heparin (HS-GAG) metabolism (Xenopus tropicalis)
HS-GAG biosynthesis (Xenopus tropicalis)
HS6STs sulfate GlcN at C6 in heparan sulfate/heparin (Xenopus tropicalis)
HS/HPIN-PGs [Golgi lumen] (Xenopus tropicalis)
sdc2 [Golgi lumen] (Xenopus tropicalis)
Some HSPGs are secreted to the plasma membrane (Xenopus tropicalis)
HSPGs [Golgi lumen] (Xenopus tropicalis)
HS/HPIN-PGs [Golgi lumen] (Xenopus tropicalis)
sdc2 [Golgi lumen] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:Q28HM3
Gene Names
sdc2
Reference Genes
BioGPS Gene:549917 sdc2
ENSEMBL:ENSXETG00000035467
KEGG Gene (Xenopus tropicalis):549917 sdc2
Monarch:549917 sdc2
NCBI Gene:549917 sdc2
Reference Transcript
RefSeq:NM_001017163.2 sdc2
Other Identifiers
549917
GO:0016020
Participates
as a member of
HS/HPIN-PGs [Golgi lumen] (Xenopus tropicalis)
Other forms of this molecule
sdc2 [plasma membrane]
phospho-sdc2 [plasma membrane]
sdc2 [lysosomal lumen]
sdc2 [lysosomal lumen]
sdc2 [Golgi lumen]
sdc2 [Golgi lumen]
sdc2 [Golgi lumen]
sdc2 [plasma membrane]
sdc2 [plasma membrane]
sdc2 [plasma membrane]
sdc2 [plasma membrane]
sdc2 [plasma membrane]
sdc2 [plasma membrane]
sdc2 [endoplasmic reticulum lumen]
phospho-sdc2 [endoplasmic reticulum lumen]
sdc2 [Golgi lumen]
sdc2 [Golgi lumen]
sdc2 [Golgi lumen]
sdc2 [Golgi lumen]
sdc2 [Golgi lumen]
sdc2 [Golgi lumen]
sdc2 [Golgi lumen]
sdc2 [Golgi lumen]
sdc2 [Golgi lumen]
sdc2 [Golgi lumen]
sdc2 [Golgi lumen]
sdc2 [Golgi lumen]
Inferred From
HS(6)-SDC2 [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63666) at unknown position
Modification
beta-D-IdoA-(1->4)-alpha-D-GlcNS6S-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
RefSeq
NP_001017163.1
Xenbase
XB-GENE-6455361
Ensembl
ENSXETG00000035467
,
ENSXETT00000069117
,
ENSXETP00000080997
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