Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Content
Table of Contents
DOIs
Data Schema
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
Linking to Us
Citing us
Tools
Pathway Browser
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Content
Table of Contents
DOIs
Data Schema
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
Linking to Us
Citing us
Tools
Pathway Browser
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
Search ...
Go!
vps41 [Golgi lumen]
Stable Identifier
R-XTR-2046218
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
Golgi lumen
Synonyms
Gal-glycan OGN, F6QZJ8
Locations in the PathwayBrowser
Expand all
Metabolism (Xenopus tropicalis)
Metabolism of carbohydrates (Xenopus tropicalis)
Glycosaminoglycan metabolism (Xenopus tropicalis)
Keratan sulfate/keratin metabolism (Xenopus tropicalis)
Keratan sulfate biosynthesis (Xenopus tropicalis)
B3GNT1,2,3,4,7 add GlcNAc to form Keratan-PG (Xenopus tropicalis)
Gal-glycan-protein [Golgi lumen] (Xenopus tropicalis)
vps41 [Golgi lumen] (Xenopus tropicalis)
B4GALTs transfer Gal to the N-glycan precursor (Xenopus tropicalis)
Gal-glycan-protein [Golgi lumen] (Xenopus tropicalis)
vps41 [Golgi lumen] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:F6QZJ8
Gene Names
vps41
Reference Genes
BioGPS Gene:100489726 vps41
ENSEMBL:ENSXETG00000016782 vps41
ENSEMBL:ENSXETG00000027245
Monarch:100489726 vps41
NCBI Gene:100489726 vps41
Reference Transcript
RefSeq:XM_004912520.3 vps41
Other Identifiers
100487346
GO:0003674
GO:0005515
GO:0005575
GO:0005622
GO:0005737
GO:0005764
GO:0005768
GO:0005769
GO:0005770
GO:0005773
GO:0005794
GO:0006605
GO:0006623
GO:0006810
GO:0006886
GO:0007034
GO:0008150
GO:0010008
GO:0015031
GO:0016192
GO:0022607
GO:0030136
GO:0030897
GO:0031410
GO:0032991
GO:0035542
GO:0042144
GO:0043167
GO:0043226
GO:0046872
GO:0046907
GO:0061024
GO:0065003
StrEns.2686.1.S1_at
Participant Of
hasMember
Gal-glycan-protein [Golgi lumen]
Other forms of this molecule
vps41 [Golgi lumen]
vps41 [Golgi lumen]
vps41 [Golgi lumen]
vps41 [Golgi lumen]
vps41 [Golgi lumen]
vps41 [Golgi lumen]
vps41 [Golgi lumen]
vps41 [lysosomal lumen]
vps41 [lysosomal lumen]
vps41 [extracellular region]
Inferred From
Gal-glycan OGN [Golgi lumen] (Homo sapiens)
Modified Residues
Name
N4-(N-acetylamino)glucosyl-L-asparagine (ChEBI:63492) at unknown position
Modification
beta-D-GlcNAc-(1->2)-alpha-D-Man-(1->3)-[beta-D-Gal-(1->4)-beta-D-GlcNAc-(1->2)-alpha-D-Man-(1->6)]-beta-D-Man-(1->4)-beta-D-GlcNAcl-(1->4)-beta-D-GlcNAc-yl group
PsiMod Name
N4-(N-acetylamino)glucosyl-L-asparagine
PsiMod Definition
A protein modification that effectively converts an L-asparagine residue to N4-(N-acetylaminoglucosyl)-L-asparagine.
Cross References
RefSeq
XP_004912577.1
Ensembl
ENSXETP00000045198
,
ENSXETG00000027245
,
ENSXETT00000045198
© 2021
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text