Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Contributors
Papers Citing Us
Resources Guide
Collaboration
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Contributors
Papers Citing Us
Resources Guide
Collaboration
Download
Search ...
Go!
col5a2 [endoplasmic reticulum lumen]
Stable Identifier
R-XTR-2022949
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
endoplasmic reticulum lumen
Synonyms
3x4Hyp-3Hyp-5Hyl-COL5A2(27-1499), F6QGI3
Locations in the PathwayBrowser
Expand all
Extracellular matrix organization (Xenopus tropicalis)
Collagen formation (Xenopus tropicalis)
Collagen biosynthesis and modifying enzymes (Xenopus tropicalis)
COLGALT1,COLGALT2 bind Lysyl hydroxylated collagen propeptides (Xenopus tropicalis)
COLGALT1,COLGALT2:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
3,4-Hyp 5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
col5a2 [endoplasmic reticulum lumen] (Xenopus tropicalis)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
3,4-Hyp 5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
col5a2 [endoplasmic reticulum lumen] (Xenopus tropicalis)
Galactosylation of collagen propeptide hydroxylysines by PLOD3 (Xenopus tropicalis)
PLOD3:Fe2+ dimer:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum membrane] (Xenopus tropicalis)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
3,4-Hyp 5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
col5a2 [endoplasmic reticulum lumen] (Xenopus tropicalis)
Galactosylation of collagen propeptide hydroxylysines by procollagen galactosyltransferases 1, 2. (Xenopus tropicalis)
COLGALT1,COLGALT2:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
3,4-Hyp 5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
col5a2 [endoplasmic reticulum lumen] (Xenopus tropicalis)
Lysyl hydroxylated collagen propeptides dissociate from Lysyl hydroxylases (Xenopus tropicalis)
Lysyl hydroxylases:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
3,4-Hyp 5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
col5a2 [endoplasmic reticulum lumen] (Xenopus tropicalis)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
3,4-Hyp 5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
col5a2 [endoplasmic reticulum lumen] (Xenopus tropicalis)
PLOD3 binds Lysyl hydroxylated collagen propeptides (Xenopus tropicalis)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
3,4-Hyp 5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
col5a2 [endoplasmic reticulum lumen] (Xenopus tropicalis)
PLOD3:Fe2+ dimer:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum membrane] (Xenopus tropicalis)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
3,4-Hyp 5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
col5a2 [endoplasmic reticulum lumen] (Xenopus tropicalis)
Procollagen lysyl hydroxylases convert collagen lysines to 5-hydroxylysines (Xenopus tropicalis)
Lysyl hydroxylases:Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
Lysyl hydroxylated collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
3,4-Hyp 5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
col5a2 [endoplasmic reticulum lumen] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:F6QGI3
Gene Names
col5a2
Reference Genes
BioGPS Gene:100492754 col5a2
ENSEMBL:ENSXETG00000010784
KEGG Gene (Xenopus tropicalis):100492754 col5a2
Monarch:100492754 col5a2
NCBI Gene:100492754 col5a2
Reference Transcript
RefSeq:XM_002931500.5 col5a2
Other Identifiers
100492754
GO:0005198
GO:0005201
GO:0005515
GO:0005576
GO:0005581
GO:0046872
Participates
as a candidate of
3,4-Hyp 5-Hyl collagen propeptides [endoplasmic reticulum lumen] (Xenopus tropicalis)
Other forms of this molecule
col5a2 [endoplasmic reticulum lumen]
col5a2 [endoplasmic reticulum lumen]
col5a2 [endoplasmic reticulum lumen]
col5a2 [endoplasmic reticulum lumen]
col5a2 [endoplasmic reticulum lumen]
col5a2 [endoplasmic reticulum lumen]
col5a2 [endoplasmic reticulum lumen]
col5a2 [endoplasmic reticulum lumen]
col5a2 [endoplasmic reticulum lumen]
col5a2 [endoplasmic reticulum lumen]
col5a2 [endoplasmic reticulum lumen]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
col5a2 [extracellular region]
Inferred From
3x4Hyp-3Hyp-5Hyl-COL5A2(27-1499) [endoplasmic reticulum lumen]
(Homo sapiens)
Modified Residues
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,4R)-4-hydroxyproline at unknown position
PsiMod Name
(2S,4R)-4-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline
Name
(2S,3S)-3-hydroxyproline at unknown position
PsiMod Name
(2S,3S)-3-hydroxyproline
PsiMod Definition
A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.
Name
(2S,5R)-5-hydroxylysine at unknown position
PsiMod Name
(2S,5R)-5-hydroxylysine
PsiMod Definition
A protein modification that effectively converts an L-lysine residue to 5-hydroxy-L-lysine.
Cross References
RefSeq
XP_002931546.2
Xenbase
XB-GENE-6032476
Ensembl
ENSXETG00000010784
,
ENSXETT00000023577
,
ENSXETP00000023577
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text