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pabpc1 [cytosol]
Stable Identifier
R-XTR-156803
Type
Protein [EntityWithAccessionedSequence]
Species
Xenopus tropicalis
Compartment
cytosol
Synonyms
PABPC1, Q6DF12
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Xenopus tropicalis)
Deadenylation-dependent mRNA decay (Xenopus tropicalis)
Deadenylation of mRNA (Xenopus tropicalis)
CCR4-NOT complex deadenylates mRNA (Xenopus tropicalis)
Partially Deadenylated mRNA Complex [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
PARN deadenylates mRNA (Xenopus tropicalis)
Partially Deadenylated mRNA Complex [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
Nonsense-Mediated Decay (NMD) (Xenopus tropicalis)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Xenopus tropicalis)
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Xenopus tropicalis)
mRNA Cleaved by SMG6 [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Xenopus tropicalis)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
SMG6 hydrolyzes mRNA with premature termination codon (Xenopus tropicalis)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
mRNA Cleaved by SMG6 [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
UPF1 binds an mRNP with a termination codon preceding an Exon Junction Complex (Xenopus tropicalis)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Xenopus tropicalis)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
SMG1:Phosphorylated UPF1:EJC:Translated mRNP [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Xenopus tropicalis)
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Not Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Xenopus tropicalis)
Translated mRNA Complex with Premature Termination Codon Not Preceding Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Not Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
Regulation of mRNA stability by proteins that bind AU-rich elements (Xenopus tropicalis)
AUF1 (hnRNP D0) binds and destabilizes mRNA (Xenopus tropicalis)
AUF1 (hnRNP D0) is ubiquitinylated (Xenopus tropicalis)
AUF1 Complexed with Translation and Heat Shock Proteins [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
Metabolism of proteins (Xenopus tropicalis)
Translation (Xenopus tropicalis)
Eukaryotic Translation Initiation (Xenopus tropicalis)
L13a-mediated translational silencing of Ceruloplasmin expression (Xenopus tropicalis)
Association of phospho-L13a with GAIT element of Ceruloplasmin mRNA (Xenopus tropicalis)
43S: Ceruloplasmin mRNA:eIF4F:eIF4B:eIF4H:PABP [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
phospho-L13a associated wth the 3' UTR GAIT element of ceruloplasmin mRNA within the translation initiation complex [cytosol] (Xenopus tropicalis)
43S: Ceruloplasmin mRNA:eIF4F:eIF4B:eIF4H:PABP [cytosol] (Xenopus tropicalis)
pabpc1 [cytosol] (Xenopus tropicalis)
External Reference Information
External Reference
UniProt:Q6DF12
Gene Names
pabpc1
Reference Genes
BioGPS Gene:448595 pabpc1
ENSEMBL:ENSXETG00000006635
KEGG Gene (Xenopus tropicalis):448595 pabpc1
Monarch:448595 pabpc1
NCBI Gene:448595 pabpc1
Reference Transcript
RefSeq:NM_001005051.1 pabpc1
RefSeq:XM_031903314.1 pabpc1
Other Identifiers
448595
GO:0003676
GO:0003723
GO:0005737
GO:0006397
GO:0006412
GO:0016071
Participates
as a component of
AUF1 Complexed with Translation and Heat Shock Proteins [cytosol] (Xenopus tropicalis)
mRNA Cleaved by SMG6 [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
mRNA Complex with a Premature Termination Codon Not Preceding an Exon Junction [cytosol] (Xenopus tropicalis)
43S: Ceruloplasmin mRNA:eIF4F:eIF4B:eIF4H:PABP [cytosol] (Xenopus tropicalis)
Translatable mRNA Complex [cytosol] (Xenopus tropicalis)
Partially Deadenylated mRNA Complex [cytosol] (Xenopus tropicalis)
as an output of
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Xenopus tropicalis)
PARN deadenylates mRNA (Xenopus tropicalis)
CCR4-NOT complex deadenylates mRNA (Xenopus tropicalis)
Inferred From
PABPC1 [cytosol]
(Homo sapiens)
Cross References
RefSeq
NP_001005051.1
,
XP_031759174.1
Ensembl
ENSXETT00000014537
,
ENSXETP00000014537
,
ENSXETG00000006635
Xenbase
XB-GENE-963457
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