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RBM39 [nucleoplasm]
Stable Identifier
R-SSC-9770254
Type
Protein [EntityWithAccessionedSequence]
Species
Sus scrofa
Compartment
nucleoplasm
Synonyms
RBM39, A0A287BAQ0
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Sus scrofa)
Processing of Capped Intron-Containing Pre-mRNA (Sus scrofa)
mRNA 3'-end processing (Sus scrofa)
mRNA Polyadenylation (Sus scrofa)
Core CPA complex binds capped pre-mRNA (Sus scrofa)
Core CPA complex:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Sus scrofa)
RBM39 [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Sus scrofa)
RBM39 [nucleoplasm] (Sus scrofa)
PABPN1-stimulated PAPOL synthesizes polyA tail at distal 3'UTR PAS (Sus scrofa)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
RBM39 [nucleoplasm] (Sus scrofa)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
RBM39 [nucleoplasm] (Sus scrofa)
PABPN1-stimulated PAPOL synthesizes polyA tail at intronic PAS (Sus scrofa)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Sus scrofa)
RBM39 [nucleoplasm] (Sus scrofa)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at intronic PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Sus scrofa)
RBM39 [nucleoplasm] (Sus scrofa)
PABPN1-stimulated PAPOL synthesizes polyA tail at proximal 3'UTR PAS (Sus scrofa)
Ub-K63-CPA:PABPN1:Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
RBM39 [nucleoplasm] (Sus scrofa)
Ub-K63-CPA:Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
RBM39 [nucleoplasm] (Sus scrofa)
PP1 dephosphorylates RNA Pol II (Sus scrofa)
CPA:Spliceosomal A complex (uncleaved pre-mRNA) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Sus scrofa)
RBM39 [nucleoplasm] (Sus scrofa)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
RBM39 [nucleoplasm] (Sus scrofa)
RBBP6 activates CPSF complex (Sus scrofa)
CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
RBM39 [nucleoplasm] (Sus scrofa)
Ub-K63-CPA:Spliceosomal A complex (uncleaved pre-mRNA, RNA Pol II Ser2 dephosphorylated) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
RBM39 [nucleoplasm] (Sus scrofa)
mRNA Splicing (Sus scrofa)
mRNA Splicing - Major Pathway (Sus scrofa)
Formation of the Spliceosomal E complex (Sus scrofa)
RBM39 [nucleoplasm] (Sus scrofa)
Spliceosomal E complex [nucleoplasm] (Sus scrofa)
RBM39 [nucleoplasm] (Sus scrofa)
External Reference Information
External Reference
UniProt:A0A287BAQ0
Gene Names
RBM39
Reference Genes
BioGPS Gene:100049658 RBM39
ENSEMBL:ENSSSCG00000007309.5
KEGG:ssc:100049658 RBM39
Monarch:100049658 RBM39
NCBI Gene:100049658 RBM39
UCSC:A0A287BAQ0 RBM39
Reference Transcript
RefSeq:XM_003359964.4 RBM39
Other Identifiers
100049658
GO:0003676
GO:0003723
GO:0005634
GO:0005654
GO:0005856
GO:0006397
GO:0008380
GO:0010468
GO:0015630
GO:0016071
GO:0016607
GO:0032991
GO:0034451
GO:0048024
GO:0050733
GO:0051252
GO:1990446
Ssc.1011.1.S1_at
Ssc.8220.1.A1_at
Ssc.8220.1.A2_at
Participates
as a component of
Spliceosomal A complex (pre-mRNA cleaved at intronal PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at intronic PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA cleaved at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at proximal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (RNA Pol II Ser5 dephosphorylated) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA cleaved at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (pre-mRNA polyadenylated at distal 3'UTR PAS) [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (capped, methylated pre-mRNA) [nucleoplasm] (Sus scrofa)
Spliceosomal E complex [nucleoplasm] (Sus scrofa)
Spliceosomal A complex (capped, methylated, polyadenylated pre-mRNA) [nucleoplasm] (Sus scrofa)
Spliceosomal Pre-B complex [nucleoplasm] (Sus scrofa)
as an input of
Formation of the Spliceosomal E complex (Sus scrofa)
Other forms of this molecule
RBM39 [endoplasmic reticulum membrane]
RBM39 [plasma membrane]
RBM39 [nuclear envelope]
Inferred From
RBM39 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_003360012.1
ENSEMBL
ENSSSCP00000053421
,
ENSSSCT00000061882
,
ENSSSCG00000007309
VGNC
95711
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