Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Funding
Editorial Calendar
Release Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Digital Preservation
Contact us
Content
Table of Contents
DOIs
Data Schema
Reactome Research Spotlight
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
Cytomics
Review Status of Reactome Events
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Curator Guide
Release Documentation
Computationally inferred events
FAQ
Linking to Us
Citing us
Tools
Pathway Browser
Analyse gene list
Analyse gene expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site Search
Community
Contribute Pathway Knowledge
Icon Library
Outreach
Events
Publications
Partners
Contributors
Resources Guide
Download
Search ...
Go!
AFF4 [nucleoplasm]
Stable Identifier
R-SSC-8932788
Type
Protein [EntityWithAccessionedSequence]
Species
Sus scrofa
Compartment
nucleoplasm
Synonyms
AFF4, I3L7N2
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Sus scrofa)
RNA Polymerase II Transcription (Sus scrofa)
RNA Polymerase II Pre-transcription Events (Sus scrofa)
2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing (Sus scrofa)
Paused processive elongation complex [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Abortive termination of elongation after arrest (Sus scrofa)
Aborted elongation complex after arrest [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Elongating transcript encounters a lesion in the template (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Resumption of elongation after recovery from pausing (Sus scrofa)
Paused processive elongation complex [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
TFIIS-mediated recovery of elongation from arrest (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
RNA Polymerase II Transcription Elongation (Sus scrofa)
Addition of nucleotides leads to transcript elongation (Sus scrofa)
Elongation complex [nucleoplasm] (Sus scrofa)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Formation of RNA Pol II elongation complex (Sus scrofa)
Hyperphosphorylation (Ser2) of RNA Pol II CTD by P-TEFb complex (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Recruitment of elongation factors to form elongation complex (Sus scrofa)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Elongation complex [nucleoplasm] (Sus scrofa)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Pol II elongation complex moves on the template as transcript elongates (Sus scrofa)
Elongation complex prior to separation [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Separation of elongating transcript from template (Sus scrofa)
Elongation complex prior to separation [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Sus scrofa)
AFF4 [nucleoplasm] (Sus scrofa)
External Reference Information
External Reference
UniProt:I3L7N2
Gene Names
AFF4
Reference Genes
BioGPS Gene:100524487 AFF4
ENSEMBL:ENSSSCG00000014291.5
ENSEMBL:ENSSSCG00005007786.1 AFF4
KEGG Gene (Sus scrofa):100524487 AFF4
Monarch:100524487 AFF4
NCBI Gene:100524487 AFF4
Reference Transcript
RefSeq:XM_003123929.5 AFF4
Other Identifiers
100524487
GO:0000791
GO:0001650
GO:0005634
GO:0005654
GO:0005694
GO:0005730
GO:0007286
GO:0008023
GO:0010468
GO:0022414
GO:0030154
GO:0032783
GO:0043226
GO:0048856
Ssc.13568.1.A1_at
Ssc.6529.1.A1_at
Ssc.6529.2.S1_at
Participates
as an output of
Elongating transcript encounters a lesion in the template (Sus scrofa)
as a component of
Aborted elongation complex after arrest [nucleoplasm] (Sus scrofa)
Paused processive elongation complex [nucleoplasm] (Sus scrofa)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Sus scrofa)
Elongation complex prior to separation [nucleoplasm] (Sus scrofa)
Processive elongation complex [nucleoplasm] (Sus scrofa)
Early elongation complex with hyperphosphorylated Pol II CTD [nucleoplasm] (Sus scrofa)
as an input of
Hyperphosphorylation (Ser2) of RNA Pol II CTD by P-TEFb complex (Sus scrofa)
Inferred From
AFF4 [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
XP_003123977.3
OpenTargets
ENSG00000072364
Ensembl
ENSSSCG00000014291
,
ENSSSCP00000020038
,
ENSSSCT00000025744
VGNC
85169
© 2024
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text