Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Content
Table of Contents
DOIs
Data Schema
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
Linking to Us
Citing us
Tools
Pathway Browser
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Statistics
Our Logo
License Agreement
Privacy Notice
Disclaimer
Content
Table of Contents
DOIs
Data Schema
ORCID Integration Project
COVID-19 Disease Pathways
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Diseases
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
Linking to Us
Citing us
Tools
Pathway Browser
Analysis Data
Analysis Gene Expression
Species Comparison
Tissue Distribution
Analysis Service
Content Service
ReactomeFIViz
Overlays
DisGeNET
Web
API
Advanced Data Search
Site Search
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
Search ...
Go!
Ghost homologue of HMGN1 [nucleoplasm]
Stable Identifier
R-SSC-6781979
Type
Genes and Transcripts [GenomeEncodedEntity]
Species
Sus scrofa
Compartment
nucleoplasm
Locations in the PathwayBrowser
Expand all
DNA Repair (Sus scrofa)
Nucleotide Excision Repair (Sus scrofa)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Sus scrofa)
Dual incision in TC-NER (Sus scrofa)
3' incision by ERCC5 (XPG) in TC-NER (Sus scrofa)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
5' incision of damaged DNA strand by ERCC1:ERCC4 in TC-NER (Sus scrofa)
TC-NER incision complex [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
Binding of ERCC1:ERCC4 (ERCC1:XPF) to pre-incision complex in TC-NER (Sus scrofa)
TC-NER incision complex [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
DNA polymerases delta, epsilon or kappa bind the TC-NER site (Sus scrofa)
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
ERCC2-facilitated RNA Pol II backtracking in TC-NER (Sus scrofa)
TC-NER pre-incision complex [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
ERCC3-facilitated RNA Pol II backtracking in TC-NER (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
ERCC5 and RPA bind TC-NER site (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:RPA:ERCC5:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
Formation of TC-NER Pre-Incision Complex (Sus scrofa)
UVSSA:USP7 deubiquitinates ERCC6 (Sus scrofa)
TC-NER pre-incision complex [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
Gap-filling DNA repair synthesis and ligation in TC-NER (Sus scrofa)
Ligation of newly synthesized repair patch to incised DNA in TC-NER (Sus scrofa)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
Repair DNA synthesis of ~27-30 bases long patch by POLD, POLE or POLK in TC-NER (Sus scrofa)
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm] (Sus scrofa)
Ghost homologue of HMGN1 [nucleoplasm] (Sus scrofa)
Participant Of
hasComponent
TC-NER incision complex: 5'-incised damaged DNA:trimmed nascent mRNA:(PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm]
TC-NER incision complex:5'-incised damaged DNA:trimmed nascent mRNA [nucleoplasm]
TC-NER post-incision complex:dsDNA with transcription bubble [nucleoplasm]
TC-NER post-incision complex:incised DNA without lesion:trimmed nascent mRNA:PCNA:(PCNA:POLD,POLE),(MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm]
TC-NER post-incision complex:SSB-dsDNA:trimmed nascent mRNA: (PCNA:POLD,POLE), (MonoUb:K164-PCNA:POLK):RPA:RFC [nucleoplasm]
TC-NER pre-incision complex [nucleoplasm]
TC-NER pre-incision complex:Open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm]
TC-NER pre-incision complex:Partially open bubble damaged DNA template:trimmed nascent mRNA [nucleoplasm]
Ubiquitinated,hyperphosphorylated RNA Pol II:Damaged DNA template:nascent mRNA hybrid:TFIIH:Ub:ERCC6:ERCC8:DDB1:CUL4:RBX1:UVSSA:USP7:XAB2 complex:XPA:TCEA1:HMGN1:EP300 [nucleoplasm]
Inferred From
HMGN1 [nucleoplasm] (Homo sapiens)
© 2021
Reactome
Cite Us!
Cite Us!
Cite Us!
Warning!
Unable to extract citation. Please try again later.
Download As:
BibTeX
RIS
Text
