Reactome | COL6A6 [extracellular region]

COL6A6 [extracellular region]

Stable Identifier

R-SSC-2470098

Type

Protein [EntityWithAccessionedSequence]

Species

Sus scrofa

Compartment

extracellular region

Synonyms

3Hyp-4Hyp-GalHyl-COL6A6(20-?), A0A5G2R0Y2

Locations in the PathwayBrowser

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Extracellular matrix organization (Sus scrofa)

- Degradation of the extracellular matrix (Sus scrofa)
  - Collagen degradation (Sus scrofa)
    - Collagen type VI degradation by MMP2,9,11 (Sus scrofa)
      - Cleaved collagen type VI fibril [extracellular region] (Sus scrofa)
        
        Cleaved tropocollagen type VI tetramer [extracellular region] (Sus scrofa)
        
        Cleaved tropocollagen type VI dimer [extracellular region] (Sus scrofa)
        
        Cleaved tropocollagen type VI [extracellular region] (Sus scrofa)
        
        Cleaved collagen alpha 3-6(VI) [extracellular region] (Sus scrofa)
        
        COL6A6 [extracellular region] (Sus scrofa)

External Reference Information

External Reference

UniProt:A0A5G2R0Y2

Gene Names

COL6A6

Reference Genes

ENSEMBL:ENSSSCG00000037430.3

UCSC:A0A5G2R0Y2 COL6A6

Other Identifiers

100516642

GO:0005576

GO:0030312

GO:0031012

Participates

as a member of

Cleaved collagen alpha 3-6(VI) [extracellular region] (Sus scrofa)

Other forms of this molecule

COL6A6 [endoplasmic reticulum lumen]

COL6A6 [extracellular region]

COL6A6 [endoplasmic reticulum lumen]

Inferred From

Cleaved collagen alpha-6(VI) chains [extracellular region] (Homo sapiens)

3Hyp-4Hyp-GalHyl-COL6A6(20-?) [extracellular region] (Homo sapiens)

Modified Residues

Name

(2S,4R)-4-hydroxyproline at unknown position

PsiMod Name

(2S,4R)-4-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 4-hydroxy-L-proline

Name

(2S,3S)-3-hydroxyproline at unknown position

PsiMod Name

(2S,3S)-3-hydroxyproline

PsiMod Definition

A protein modification that effectively converts an L-proline residue to 3-hydroxy-L-proline.

Name

O5-galactosyl-L-hydroxylysine at unknown position

PsiMod Name

O5-galactosyl-L-hydroxylysine

PsiMod Definition

A protein modification that effectively converts an L-lysine residue to O5-galactosyl-L-hydroxylysine.

Cross References

ENSEMBL

ENSSSCG00000037430, ENSSSCT00000070934, ENSSSCP00000070825

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