Reactome | SDC1 [Golgi lumen]

SDC1 [Golgi lumen]

Stable Identifier

R-SSC-2076520

Type

Protein [EntityWithAccessionedSequence]

Species

Sus scrofa

Compartment

Golgi lumen

Synonyms

HS(6)-SDC1, K7GNF5

Locations in the PathwayBrowser

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External Reference Information

External Reference

UniProt:K7GNF5

Gene Names

SDC1

Reference Genes

BioGPS Gene:100519770 SDC1

ENSEMBL:ENSSSCG00000008601.6

KEGG Gene (Sus scrofa):100519770 SDC1

Monarch:100519770 SDC1

NCBI Gene:100519770 SDC1

Reference Transcript

RefSeq:NM_001243190.1 SDC1

Other Identifiers

100519770

GO:0005576

GO:0005886

GO:0006898

GO:0009897

GO:0009986

GO:0016020

GO:0016192

GO:0023052

GO:0030154

GO:0038024

GO:0042802

GO:0048627

GO:0048856

GO:0055002

GO:0060070

GO:1903543

GO:1903553

Ssc.31172.1.S1_at

Ssc.31172.2.S1_at

Ssc.31172.3.S1_at

Participates

as a member of

HS/HPIN-PGs [Golgi lumen] (Sus scrofa)

Other forms of this molecule

SDC1 [lysosomal lumen]

SDC1 [Golgi lumen]

SDC1 [plasma membrane]

SDC1 [Golgi lumen]

Inferred From

HS(6)-SDC1 [Golgi lumen] (Homo sapiens)

Modified Residues

Name

O-xylosyl-L-serine (ChEBI:63666) at unknown position

Modification

beta-D-IdoA-(1->4)-alpha-D-GlcNS6S-(1->4)-beta-D-IdoA2S-(1->4)-alpha-D-GlcNS3S-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group

PsiMod Name

O-xylosyl-L-serine

PsiMod Definition

A protein modification that effectively converts an L-serine residue to O3-xylosylserine.

Cross References

RefSeq

NP_001230119.1

OpenTargets

ENSG00000115884

Ensembl

ENSSSCP00000029408, ENSSSCG00000008601, ENSSSCT00000033465

VGNC

92654

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