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VCAN [Golgi lumen]
Stable Identifier
R-SSC-2064169
Type
Protein [EntityWithAccessionedSequence]
Species
Sus scrofa
Compartment
Golgi lumen
Synonyms
chondroitin(3)-VCAN, F1REZ2
Locations in the PathwayBrowser
Expand all
Metabolism (Sus scrofa)
Metabolism of carbohydrates (Sus scrofa)
Glycosaminoglycan metabolism (Sus scrofa)
Chondroitin sulfate/dermatan sulfate metabolism (Sus scrofa)
Chondroitin sulfate biosynthesis (Sus scrofa)
CHPF,CHSY3 transfer GalNAc to chondroitin (Sus scrofa)
chondroitin(3)-core proteins [Golgi lumen] (Sus scrofa)
VCAN [Golgi lumen] (Sus scrofa)
CHST3,7 transfer SO4(2-) to position 6 of GalNAc on chondroitin chains (Sus scrofa)
chondroitin(3)-core proteins [Golgi lumen] (Sus scrofa)
VCAN [Golgi lumen] (Sus scrofa)
CHSY1 transfers GalNAc to chondroitin (Sus scrofa)
chondroitin(3)-core proteins [Golgi lumen] (Sus scrofa)
VCAN [Golgi lumen] (Sus scrofa)
Chondroitin can be sulfated on position 4 of GalNAc by CHST9, 11, 12 and 13 (Sus scrofa)
chondroitin(3)-core proteins [Golgi lumen] (Sus scrofa)
VCAN [Golgi lumen] (Sus scrofa)
Dermatan sulfate biosynthesis (Sus scrofa)
Dermatan-sulfate epimerase (DSE) converts chondroitin sulfate (CS) to dermatan sulfate (DS) (Sus scrofa)
DSE,DSEL substrates [Golgi lumen] (Sus scrofa)
chondroitin(3)-core proteins [Golgi lumen] (Sus scrofa)
VCAN [Golgi lumen] (Sus scrofa)
External Reference Information
External Reference
UniProt:F1REZ2
Gene Names
VCAN
Reference Genes
ENSEMBL:ENSSSCG00000014136.6
Other Identifiers
100514895
397328
GO:0001501
GO:0002052
GO:0005509
GO:0005540
GO:0005576
GO:0005615
GO:0007155
GO:0007417
GO:0010001
GO:0030154
GO:0030246
GO:0030312
GO:0031012
GO:0045202
GO:0048856
GO:0072534
Ssc.16024.1.S1_at
Ssc.26647.1.S1_at
Ssc.5663.1.S1_at
Participates
as a member of
chondroitin(3)-core proteins [Golgi lumen] (Sus scrofa)
Other forms of this molecule
VCAN [lysosomal lumen]
VCAN [lysosomal lumen]
VCAN [lysosomal lumen]
VCAN [lysosomal lumen]
VCAN [lysosomal lumen]
VCAN [endoplasmic reticulum lumen]
phospho-VCAN [endoplasmic reticulum lumen]
VCAN [Golgi lumen]
VCAN [Golgi lumen]
VCAN [Golgi lumen]
VCAN [Golgi lumen]
VCAN [Golgi lumen]
VCAN [Golgi lumen]
VCAN [Golgi lumen]
VCAN [Golgi lumen]
VCAN [Golgi lumen]
VCAN [Golgi lumen]
VCAN [Golgi lumen]
VCAN [Golgi lumen]
VCAN [extracellular region]
VCAN [extracellular region]
VCAN [extracellular region]
VCAN [Golgi lumen]
VCAN [Golgi lumen]
VCAN [extracellular region]
VCAN [extracellular region]
VCAN [extracellular region]
VCAN [lysosomal lumen]
VCAN [lysosomal lumen]
Inferred From
chondroitin(3)-VCAN [Golgi lumen]
(Homo sapiens)
Modified Residues
Name
O-xylosyl-L-serine (ChEBI:63511) at unknown position
Modification
beta-D-GalNAc-(1->4)-beta-D-GlcA-(1->3)-beta-D-GalNAc-(1->4)-beta-D-GlcA-(1->3)-beta-D-Gal-(1->3)-beta-D-Gal-(1->4)-beta-D-Xyl-yl group
PsiMod Name
O-xylosyl-L-serine
PsiMod Definition
A protein modification that effectively converts an L-serine residue to O3-xylosylserine.
Cross References
OpenTargets
ENSG00000038427
Ensembl
ENSSSCP00000015031
,
ENSSSCG00000014136
,
ENSSSCT00000015440
VGNC
108163
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