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UBI4 [nucleoplasm]
Stable Identifier
R-SCE-939844
Type
Protein [EntityWithAccessionedSequence]
Species
Saccharomyces cerevisiae
Compartment
nucleoplasm
Synonyms
UBA52(1-76), P0CG63
Locations in the PathwayBrowser for interactor UniProt:P40343 VPS27
Expand all
Cell Cycle (Saccharomyces cerevisiae)
Cell Cycle, Mitotic (Saccharomyces cerevisiae)
S Phase (Saccharomyces cerevisiae)
Synthesis of DNA (Saccharomyces cerevisiae)
Switching of origins to a post-replicative state (Saccharomyces cerevisiae)
Orc1 removal from chromatin (Saccharomyces cerevisiae)
Phosphorylated Orc1 is ubiquitinated while still associated with chromatin (Saccharomyces cerevisiae)
UBI4 [nucleoplasm] (Saccharomyces cerevisiae)
DNA Repair (Saccharomyces cerevisiae)
DNA Damage Bypass (Saccharomyces cerevisiae)
Translesion synthesis by Y family DNA polymerases bypasses lesions on DNA template (Saccharomyces cerevisiae)
Termination of translesion DNA synthesis (Saccharomyces cerevisiae)
USP10 deubiquitinates monoUb:K164,ISG:K164,ISG:K168-PCNA (Saccharomyces cerevisiae)
UBI4 [nucleoplasm] (Saccharomyces cerevisiae)
DNA Double-Strand Break Repair (Saccharomyces cerevisiae)
DNA Double Strand Break Response (Saccharomyces cerevisiae)
Recruitment and ATM-mediated phosphorylation of repair and signaling proteins at DNA double strand breaks (Saccharomyces cerevisiae)
RNF8 and RNF168 ubiquitinate H2AFX (Saccharomyces cerevisiae)
UBI4 [nucleoplasm] (Saccharomyces cerevisiae)
RNF8 and RNF168 ubiquitinate KDM4A,B (Saccharomyces cerevisiae)
UBI4 [nucleoplasm] (Saccharomyces cerevisiae)
Nucleotide Excision Repair (Saccharomyces cerevisiae)
Transcription-Coupled Nucleotide Excision Repair (TC-NER) (Saccharomyces cerevisiae)
Formation of TC-NER Pre-Incision Complex (Saccharomyces cerevisiae)
ERCC8:DDB1:CUL4:RBX1 ubiquitinates ERCC6 and RNA Pol II (Saccharomyces cerevisiae)
UBI4 [nucleoplasm] (Saccharomyces cerevisiae)
UVSSA:USP7 deubiquitinates ERCC6 (Saccharomyces cerevisiae)
UBI4 [nucleoplasm] (Saccharomyces cerevisiae)
DNA Replication (Saccharomyces cerevisiae)
Synthesis of DNA (Saccharomyces cerevisiae)
Switching of origins to a post-replicative state (Saccharomyces cerevisiae)
Orc1 removal from chromatin (Saccharomyces cerevisiae)
Phosphorylated Orc1 is ubiquitinated while still associated with chromatin (Saccharomyces cerevisiae)
UBI4 [nucleoplasm] (Saccharomyces cerevisiae)
Metabolism of proteins (Saccharomyces cerevisiae)
Post-translational protein modification (Saccharomyces cerevisiae)
Deubiquitination (Saccharomyces cerevisiae)
Ub-specific processing proteases (Saccharomyces cerevisiae)
USP3,SAGA deubiquitinate Histone H2A,H2B (Saccharomyces cerevisiae)
UBI4 [nucleoplasm] (Saccharomyces cerevisiae)
Protein ubiquitination (Saccharomyces cerevisiae)
Synthesis of active ubiquitin: roles of E1 and E2 enzymes (Saccharomyces cerevisiae)
UBA1 adenylates ubiquitin in the nucleoplasm (Saccharomyces cerevisiae)
UBI4 [nucleoplasm] (Saccharomyces cerevisiae)
Ub-Cys632-UBA1 adenylates ubiquitin in the nucleus (Saccharomyces cerevisiae)
UBI4 [nucleoplasm] (Saccharomyces cerevisiae)
Signal Transduction (Saccharomyces cerevisiae)
Intracellular signaling by second messengers (Saccharomyces cerevisiae)
PIP3 activates AKT signaling (Saccharomyces cerevisiae)
PTEN Regulation (Saccharomyces cerevisiae)
Regulation of PTEN localization (Saccharomyces cerevisiae)
USP7 deubiquitinates monoubiquitinated PTEN (Saccharomyces cerevisiae)
UBI4 [nucleoplasm] (Saccharomyces cerevisiae)
External Reference Information
External Reference
UniProt:P0CG63 UBI4
Gene Names
UBI4, SCD2, YLL039C
Chain
chain:1-76, chain:77-152, chain:153-228, chain:229-304, chain:305-380, propeptide:-
Reference Genes
BioGPS Gene:850620 UBI4
KEGG:sce:YLL039C UBI4
Monarch:850620 UBI4
NCBI Gene:850620 UBI4
UCSC:P0CG63 UBI4
Reference Transcript
RefSeq:NM_001181859.1 UBI4
Other Identifiers
10392_at
1772373_at
850620
GO:0000209
GO:0003674
GO:0005515
GO:0005575
GO:0005634
GO:0005737
GO:0005777
GO:0005829
GO:0006513
GO:0008150
GO:0008152
GO:0016567
GO:0016579
GO:0019899
GO:0019941
GO:0030437
GO:0031386
GO:0031625
GO:0043008
GO:0043934
GO:0051321
GO:0051603
GO:0070647
Participates
as an output of
USP3,SAGA deubiquitinate Histone H2A,H2B (Saccharomyces cerevisiae)
USP10 deubiquitinates monoUb:K164,ISG:K164,ISG:K168-PCNA (Saccharomyces cerevisiae)
UVSSA:USP7 deubiquitinates ERCC6 (Saccharomyces cerevisiae)
USP7 deubiquitinates monoubiquitinated PTEN (Saccharomyces cerevisiae)
as a component of
Ub:E2 (UBA1 substrate) [nucleoplasm] (Saccharomyces cerevisiae)
Ub-Cys632-UBA1 [nucleoplasm] (Saccharomyces cerevisiae)
Ub:UBE2A,B [nucleoplasm] (Saccharomyces cerevisiae)
Ub:UBE2N [nucleoplasm] (Saccharomyces cerevisiae)
Ub:ERCC6 [nucleoplasm] (Saccharomyces cerevisiae)
Ubiquitinated RNA Polymerase II holoenzyme complex (hyperphosphorylated) [nucleoplasm] (Saccharomyces cerevisiae)
MonoUb:K164-PCNA [nucleoplasm] (Saccharomyces cerevisiae)
as an input of
Ub-Cys632-UBA1 adenylates ubiquitin in the nucleus (Saccharomyces cerevisiae)
UBA1 adenylates ubiquitin in the nucleoplasm (Saccharomyces cerevisiae)
ERCC8:DDB1:CUL4:RBX1 ubiquitinates ERCC6 and RNA Pol II (Saccharomyces cerevisiae)
Phosphorylated Orc1 is ubiquitinated while still associated with chromatin (Saccharomyces cerevisiae)
RNF8 and RNF168 ubiquitinate KDM4A,B (Saccharomyces cerevisiae)
RNF8 and RNF168 ubiquitinate H2AFX (Saccharomyces cerevisiae)
Other forms of this molecule
UBI4 [cytosol]
UBI4(1-76) [cytosol]
UBI4 [cytosol]
UBI4 [nucleoplasm]
UBI4 [nucleoplasm]
UBI4 [nucleoplasm]
UBI4 [cytosol]
UBI4 [nucleoplasm]
UBI4 [nucleoplasm]
UBI4 [nucleoplasm]
UBI4 [nucleoplasm]
UBI4 [cytosol]
UBI4 [cytosol]
UBI4 [cytosol]
UBI4 [cytosol]
UBI4 [cytosol]
UBI4 [endosome membrane]
phospho-UBI4 [cytosol]
UBI4 [cytosol]
phospho-UBI4 [nucleoplasm]
UBI4 [cytosol]
UBI4 [endocytic vesicle membrane]
Inferred From
Ub [nucleoplasm]
(Homo sapiens)
UBA52(1-76) [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_013061.1
ENSEMBL
YLL039C
,
YLL039C_mRNA
PRO
P0CG63
PDB
1ZW7
,
4Q5E
,
3OLM
,
8DAT
,
4HCN
,
4NNJ
,
1OTR
,
2JWZ
,
2JT4
,
2KDI
,
2L00
,
8DAW
,
3L0W
,
8DAU
,
1WR1
,
3CMM
,
1Q0W
,
2G3Q
,
4Q5H
,
8DAV
,
3L10
Interactors (8)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P32628
2
RAD23 [nucleoplasm]
(R-SCE-62590)
RAD23 [nucleoplasm]
(R-SCE-5688076)
0.858
8
UniProt:P48510
2
DSK2 [cytosol]
(R-SCE-8866006)
DSK2 [cytosol]
(R-SCE-8866007)
0.766
7
UniProt:P40087 DDI1
0.658
3
UniProt:P40343 VPS27
0.618
5
UniProt:P15108
6
HSP90AA1 [ficolin-1-rich granule lumen]
(R-SCE-6801470-2)
HSP90AA1 [extracellular region]
(R-SCE-3221946-2)
HSP90AA1 [secretory granule lumen]
(R-SCE-6801515-2)
HSP90AA1 [plasma membrane]
(R-SCE-534996-2)
HSP90AA1 [nucleoplasm]
(R-SCE-5082401-2)
HSP90AA1 [cytosol]
(R-SCE-192864-2)
0.609
3
UniProt:P23301
3
HYP2 [cytosol]
(R-SCE-204650-2)
HYP2 [cytosol]
(R-SCE-204612-2)
HYP2 [cytosol]
(R-SCE-3149584-2)
0.609
2
UniProt:P54787
6
VPS9 [cytosol]
(R-SCE-8875290)
VPS9 [cytosol]
(R-SCE-8875419)
VPS9 [cytosol]
(R-SCE-8875287)
VPS9 [cytosol]
(R-SCE-8875293)
VPS9 [cytosol]
(R-SCE-8875292)
VPS9 [cytosol]
(R-SCE-8871123)
0.527
2
UniProt:P48365
2
GYP7 [cytosol]
(R-SCE-8854150)
GYP7 [autophagosome]
(R-SCE-8854607)
0.524
2
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