Toggle navigation
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Statistics
Our Logo
License Agreement
Disclaimer
Content
Table of Contents
DOIs
Data Schema
ORCID Integration Project
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Diseases
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
Linking to Us
Citing us
Tools
Pathway Browser
Analyze Data
Species Comparison
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site map
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
About
What is Reactome ?
News
Team
Scientific Advisory Board
Editorial Calendar
Statistics
Our Logo
License Agreement
Disclaimer
Content
Table of Contents
DOIs
Data Schema
ORCID Integration Project
Docs
Userguide
Pathway Browser
How do I search ?
Details Panel
Analysis Tools
Diseases
ReactomeFIViz
Developer's Zone
Graph Database
Analysis Service
Content Service
Pathways Overview
Pathway Diagrams
Icon Info
EHLD Specs & Guidelines
Icon Library Guidelines
Data Model
Computationally inferred events
Linking to Us
Citing us
Tools
Pathway Browser
Analyze Data
Species Comparison
Analysis Service
Content Service
ReactomeFIViz
Advanced Data Search
Site map
Community
Icon Library
Outreach
Events
Training
Publications
Partners
Papers Citing Us
Resources Guide
Collaboration
Download
Search ...
Go!
UPF1 [cytosol]
Stable Identifier
R-SCE-927734
Type
Protein [EntityWithAccessionedSequence]
Species
Saccharomyces cerevisiae
Compartment
cytosol
Synonyms
P30771
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Saccharomyces cerevisiae)
Nonsense-Mediated Decay (NMD) (Saccharomyces cerevisiae)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Saccharomyces cerevisiae)
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Saccharomyces cerevisiae)
UPF1 [cytosol] (Saccharomyces cerevisiae)
SMG1 phosphorylates UPF1 (enhanced by Exon Junction Complex) (Saccharomyces cerevisiae)
SMG1:UPF1:EJC:Translated mRNP [cytosol] (Saccharomyces cerevisiae)
UPF1 [cytosol] (Saccharomyces cerevisiae)
Nonsense Mediated Decay (NMD) independent of the Exon Junction Complex (EJC) (Saccharomyces cerevisiae)
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex (Saccharomyces cerevisiae)
UPF1 [cytosol] (Saccharomyces cerevisiae)
UPF1:eRF3 Complex on Translated mRNA [cytosol] (Saccharomyces cerevisiae)
UPF1 [cytosol] (Saccharomyces cerevisiae)
External Reference Information
External Reference
UniProt:P30771
Reference Genes
BioGPS Gene:855104
ENSEMBL:YMR080C
KEGG Gene (Saccharomyces cerevisiae (strain RM11-1a)):YMR080C
Monarch:855104
NCBI Gene:855104
SGD:YMR080C
Reference Transcript
RefSeq:NM_001182579.1
Other Identifiers
2XZL
4932.YMR080C
AAA35197.1
CAA44266.1
CAA89226.1
DAA09978.1
EntrezGene:855104
EntrezGene:NAM7
GO:0000184
GO:0000932
GO:0000956
GO:0003674
GO:0003677
GO:0003723
GO:0003729
GO:0004004
GO:0004386
GO:0005524
GO:0005575
GO:0005634
GO:0005737
GO:0005829
GO:0005844
GO:0005886
GO:0006310
GO:0006325
GO:0006401
GO:0006417
GO:0006449
GO:0008150
GO:0008270
GO:0008298
GO:0009611
GO:0009863
GO:0009867
GO:0010182
GO:0016020
GO:0016567
GO:0016787
GO:0016887
GO:0023052
GO:0030466
GO:0042221
GO:0042742
GO:0043024
GO:0043167
GO:0048571
GO:0070478
GO:0070647
IPR003593
IPR018999
IPR027417
IPR040812
IPR041677
IPR041679
NM_001182579.1
NP_013797.1
PF09416
PF13086
PF13087
PF18141
SM00382
UPI000004EEDA
YMR080C
YMR080C_mRNA
Participant Of
output
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex
hasComponent
SMG1:UPF1:EJC:Translated mRNP [cytosol]
UPF1:eRF3 Complex on Translated mRNA [cytosol]
input
Formation of UPF1:eRF3 complex on mRNA with a premature termination codon and no Exon Junction Complex
Other forms of this molecule
phospho-p-4S-UPF1 [cytosol]
Inferred From
UPF1 [cytosol] (Homo sapiens)
Cross References
RefSeq
NP_013797.1
PRO
P30771
PDB
2XZL
Interactors (1)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P10592
23
HSPA8 [nucleoplasm]
(R-SCE-5082380-3)
HSPA8 [cytosol]
(R-SCE-264476-3)
HSPA6 [ficolin-1-rich granule lumen]
(R-SCE-6801512-3)
HSPA1A [ficolin-1-rich granule lumen]
(R-SCE-6801496-3)
HSPA8 [ficolin-1-rich granule lumen]
(R-SCE-6801494-3)
HSPA1A [extracellular region]
(R-SCE-6805872-3)
HSPA6 [extracellular region]
(R-SCE-6806500-3)
HSPA8 [extracellular region]
(R-SCE-6805936-3)
HSPA8 [secretory granule lumen]
(R-SCE-6801530-3)
HSPA6 [secretory granule lumen]
(R-SCE-6801472-3)
HSPA2 [nucleoplasm]
(R-SCE-912480-3)
HSPA1L [nucleoplasm]
(R-SCE-5082367-3)
HSPA1A [nucleoplasm]
(R-SCE-6792605-3)
HSPA6 [nucleoplasm]
(R-SCE-5252088-3)
HSPA13 [nucleoplasm]
(R-SCE-5252009-3)
HSPA7 [nucleoplasm]
(R-SCE-5252047-3)
HSPA1L [cytosol]
(R-SCE-3371410-3)
HSPA2 [cytosol]
(R-SCE-3371408-3)
HSPA13 [cytosol]
(R-SCE-5251981-3)
HSPA6 [cytosol]
(R-SCE-3371521-3)
HSPA7 [cytosol]
(R-SCE-5251954-3)
HSPA1A [cytosol]
(R-SCE-6792602-3)
Me3K561-HSPA8 [nucleoplasm]
(R-SCE-8932217-3)
0.527
2
© 2019
Reactome