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GTF2B [nucleoplasm]
Stable Identifier
R-SCE-65888
Type
Protein [EntityWithAccessionedSequence]
Species
Saccharomyces cerevisiae
Compartment
nucleoplasm
Synonyms
P29055
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Saccharomyces cerevisiae)
RNA Polymerase II Transcription (Saccharomyces cerevisiae)
RNA Polymerase II Pre-transcription Events (Saccharomyces cerevisiae)
Abortive Initiation Before Second Transition (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Pol II Promoter Escape Complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Abortive initiation after formation of the first phosphodiester bond (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II transcription complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Fall Back to Closed Pre-initiation Complex (Saccharomyces cerevisiae)
pol II closed pre-initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II open pre-initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RNA Polymerase II Transcription Initiation And Promoter Clearance (Saccharomyces cerevisiae)
RNA Polymerase II Promoter Escape (Saccharomyces cerevisiae)
Addition of the fourth nucleotide on the Nascent Transcript: Second Transition (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Addition of the third nucleotide on the nascent transcript (Saccharomyces cerevisiae)
pol II transcription complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Unwinding DNA for the nascent transcript (Saccharomyces cerevisiae)
pol II transcription complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Unwinding of DNA for the Nascent Transcript: Second Transition (Saccharomyces cerevisiae)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RNA Polymerase II Promoter Opening: First Transition (Saccharomyces cerevisiae)
pol II closed pre-initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II open pre-initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RNA Polymerase II Transcription Initiation (Saccharomyces cerevisiae)
NTP Binds Active Site of RNA Polymerase II (Saccharomyces cerevisiae)
Pol II initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II open pre-initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Newly Formed Phosphodiester Bond Stabilized and PPi Released (Saccharomyces cerevisiae)
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II transcription complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Nucleophillic Attack by 3'-hydroxyl Oxygen of nascent transcript on the Alpha Phosphate of NTP (Saccharomyces cerevisiae)
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Pol II initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RNA Polymerase II Transcription Pre-Initiation And Promoter Opening (Saccharomyces cerevisiae)
Binding of TFIIA and TFIIB to the pol II promoter:TFIID complex (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Binding of TFIIE to the growing preinitiation complex (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF:TFIIE complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Formation of the closed pre-initiation complex (Saccharomyces cerevisiae)
pol II closed pre-initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF:TFIIE complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
Recruitment of RNA Polymerase II Holoenzyme by TFIIF to the pol II promoter:TFIID:TFIIA:TFIIB complex (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB:Pol II:TFIIF complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RNA polymerase II transcribes snRNA genes (Saccharomyces cerevisiae)
CDK7 phosphorylates serine-5 and serine-7 of heptad repeats in C-terminal domain of RNA polymerase II at snRNA promoter (Saccharomyces cerevisiae)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RNA polymerase II (unphosphorylated):Initiation factors at promoter of snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RPAP2 binds RNA polymerase II phosphorylated at serine-7 residues of heptad repeats in the C-terminal domain (Saccharomyces cerevisiae)
RNA polymerase II (phosphoserine-5,7):Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
RPAP2:RPRD1A,B:RPRD2:RNA polymerase II (phosphoserine-5,7):Initiation factors:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
GTF2B [nucleoplasm] (Saccharomyces cerevisiae)
External Reference Information
External Reference
UniProt:P29055
Reference Genes
BioGPS Gene:856201
ENSEMBL:YPR086W
KEGG Gene (Saccharomyces cerevisiae (strain RM11-1a)):YPR086W
Monarch:856201
NCBI Gene:856201
SGD:YPR086W
Reference Transcript
RefSeq:NM_001184183.1
Other Identifiers
1772750_at
7662_at
856201
GO:0000993
GO:0001113
GO:0001129
GO:0001139
GO:0001174
GO:0003674
GO:0005515
GO:0005575
GO:0005634
GO:0006352
GO:0006366
GO:0006367
GO:0008134
GO:0008150
GO:0008270
GO:0016251
GO:0017025
GO:0019899
GO:0030674
GO:0043167
GO:0046872
GO:0051123
GO:0070897
GO:0097550
GO:2000679
Participates
as a component of
RNA polymerase II (unphosphorylated):Initiation factors [nucleoplasm] (Saccharomyces cerevisiae)
Initiation factors:CDK7:snRNA gene [nucleoplasm] (Saccharomyces cerevisiae)
Pol II Promoter Escape Complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II promoter:TFIID:TFIIA:TFIIB complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II open pre-initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
Pol II initiation complex [nucleoplasm] (Saccharomyces cerevisiae)
Pol II Initiation complex with phosphodiester-PPi intermediate [nucleoplasm] (Saccharomyces cerevisiae)
pol II transcription complex [nucleoplasm] (Saccharomyces cerevisiae)
pol II transcription complex containing 3 Nucleotide long transcript [nucleoplasm] (Saccharomyces cerevisiae)
as an output of
Abortive initiation after formation of the first phosphodiester bond (Saccharomyces cerevisiae)
Abortive Initiation Before Second Transition (Saccharomyces cerevisiae)
Addition of the fourth nucleotide on the Nascent Transcript: Second Transition (Saccharomyces cerevisiae)
as an input of
Binding of TFIIA and TFIIB to the pol II promoter:TFIID complex (Saccharomyces cerevisiae)
Inferred From
GTF2B [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_015411.1
PRO
P29055
PDB
8CEO
,
7ML2
,
7O4I
,
7UIO
,
7ZSA
,
6GYM
,
7ML1
,
7ML0
,
4V1N
,
4V1O
,
6GYL
,
5FZ5
,
7ZSB
,
7ZS9
,
5OQM
,
7UIF
,
7ML4
,
8CEN
,
7O4J
,
5OQJ
,
3K7A
,
4BBR
,
7UI9
,
3K1F
,
7O73
,
7O72
,
5FYW
,
6GYK
,
5SVA
,
4BBS
,
7O75
,
5FMF
Interactors (2)
Accession
#Entities
Entities
Confidence Score
Evidence (IntAct)
UniProt:P20434 RPB5
2
RPB5_YEAST [nucleoplasm]
(R-SCE-111833)
RPB5 [nucleoplasm]
(R-SCE-83713)
0.736
4
UniProt:P10591
17
SSA1 [cytosol]
(R-SCE-3371410-2)
SSA1 [cytosol]
(R-SCE-3371408-2)
SSA1 [cytosol]
(R-SCE-6792602-2)
SSA1 [ficolin-1-rich granule lumen]
(R-SCE-6801512-2)
SSA1 [ficolin-1-rich granule lumen]
(R-SCE-6801496-2)
SSA1 [extracellular region]
(R-SCE-6805872-2)
SSA1 [extracellular region]
(R-SCE-6806500-2)
SSA1 [secretory granule lumen]
(R-SCE-6801472-2)
SSA1 [nucleoplasm]
(R-SCE-6792605-2)
SSA1 [nucleoplasm]
(R-SCE-912480-2)
SSA1 [nucleoplasm]
(R-SCE-5082367-2)
SSA1 [nucleoplasm]
(R-SCE-5252082-2)
SSA1 [nucleoplasm]
(R-SCE-5252088-2)
SSA1 [nucleoplasm]
(R-SCE-5252009-2)
SSA1 [cytosol]
(R-SCE-5251948-2)
SSA1 [cytosol]
(R-SCE-5251981-2)
SSA1 [cytosol]
(R-SCE-3371521-2)
0.527
2
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