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Smg5 [cytosol]
Stable Identifier
R-RNO-927867
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
cytosol
Synonyms
SMG5, E9PU03
Locations in the PathwayBrowser
Expand all
Metabolism of RNA (Rattus norvegicus)
Nonsense-Mediated Decay (NMD) (Rattus norvegicus)
Nonsense Mediated Decay (NMD) enhanced by the Exon Junction Complex (EJC) (Rattus norvegicus)
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Rattus norvegicus)
Smg5 [cytosol] (Rattus norvegicus)
mRNA Cleaved by SMG6 [cytosol] (Rattus norvegicus)
Smg5 [cytosol] (Rattus norvegicus)
SMG6 hydrolyzes mRNA with premature termination codon (Rattus norvegicus)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Rattus norvegicus)
Smg5 [cytosol] (Rattus norvegicus)
mRNA Cleaved by SMG6 [cytosol] (Rattus norvegicus)
Smg5 [cytosol] (Rattus norvegicus)
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Rattus norvegicus)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Rattus norvegicus)
Smg5 [cytosol] (Rattus norvegicus)
Smg5 [cytosol] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:E9PU03
Gene Names
Smg5
Reference Genes
ENSEMBL:ENSRNOG00000019590
UCSC:E9PU03 Smg5
Reference Transcript
RefSeq:XM_001059906.6 Smg5
RefSeq:XM_002725989.5 Smg5
Other Identifiers
10816507
1375252_at
1390261_at
1395402_at
17739809
5692334
5758042
5802469
5855835
5868193
5879222
6048353
6095597
6179175
6185625
6195566
6300494
6327321
6368991
6388059
6545373
6560899
6662669
6663361
6666818
6681313
6697302
6700974
681012
A_44_P186493
A_64_P038882
GE1226838
GE14721
GO:0003677
GO:0003723
GO:0005515
GO:0005634
GO:0005737
GO:0031625
GO:0032200
GO:0032204
GO:0035303
GO:0042162
GO:0042826
GO:0043226
GO:0051721
GO:0070034
PH_rn_0016495
PH_rn_0022852
rc_AI059850_at
rc_AI230533_at
Participates
as an output of
Decay of mRNA in SMG6:SMG5:SMG7:mRNA complex (Rattus norvegicus)
as an input of
p-4S-UPF1 recruits SMG5, SMG7, SMG6, PNRC2, DCP1A, and PP2A (Rattus norvegicus)
as a component of
mRNA Cleaved by SMG6 [cytosol] (Rattus norvegicus)
Phosphorylated UPF1:SMG5:SMG7:SMG6:PP2A:Translated mRNP [cytosol] (Rattus norvegicus)
Inferred From
SMG5 [cytosol]
(Homo sapiens)
Cross References
ENSEMBL
ENSRNOT00000026514
,
ENSRNOP00000026514
RGD
1584731
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