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Ctr9 [nucleoplasm]
Stable Identifier
R-RNO-8866694
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
nucleoplasm
Synonyms
CTR9, A0A8I6A0W5
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Rattus norvegicus)
RNA Polymerase II Transcription (Rattus norvegicus)
RNA Polymerase II Pre-transcription Events (Rattus norvegicus)
2-4 nt.backtracking of Pol II complex on the template leading to elongation pausing (Rattus norvegicus)
Paused processive elongation complex [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
7-14 nt. Backtracking of Pol II complex on the template leading to elongation arrest (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
Abortive termination of elongation after arrest (Rattus norvegicus)
Aborted elongation complex after arrest [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
Elongating transcript encounters a lesion in the template (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
Resumption of elongation after recovery from pausing (Rattus norvegicus)
Paused processive elongation complex [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
TFIIS-mediated recovery of elongation from arrest (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
RNA Polymerase II Transcription Elongation (Rattus norvegicus)
Addition of nucleotides leads to transcript elongation (Rattus norvegicus)
Elongation complex [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
Formation of RNA Pol II elongation complex (Rattus norvegicus)
Recruitment of elongation factors to form elongation complex (Rattus norvegicus)
Elongation complex [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
Pol II elongation complex moves on the template as transcript elongates (Rattus norvegicus)
Elongation complex prior to separation [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
Processive elongation complex [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
Separation of elongating transcript from template (Rattus norvegicus)
Elongation complex prior to separation [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
Elongation complex with separated and uncleaved transcript [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
Metabolism of proteins (Rattus norvegicus)
Post-translational protein modification (Rattus norvegicus)
Protein ubiquitination (Rattus norvegicus)
E3 ubiquitin ligases ubiquitinate target proteins (Rattus norvegicus)
RNF20:RNF40 binds PAF complex, Ubiquitin:UBE2A,B (Ubiquitin:RAD6), WAC and Histone H2B (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
PAF1c:WAC:RNF20:RNF40:Ub:UBE2A,B:HIST1H2B [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
RNF20:RNF40 monoubiquitinates Histone H2B (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
PAF1c:WAC:RNF20:RNF40:Ub:UBE2A,B:HIST1H2B [nucleoplasm] (Rattus norvegicus)
PAF1C [nucleoplasm] (Rattus norvegicus)
Ctr9 [nucleoplasm] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:A0A8I6A0W5
Gene Names
Ctr9
Reference Genes
ENSEMBL:ENSRNOG00000017195
ENSEMBL:ENSRNOG00000017195.8 Ctr9
Other Identifiers
10709895
1389249_at
17619577
293184
5625862
5721149
5726949
5767406
5768323
5849162
5898185
5898845
5901427
5917248
5960137
5993622
6015011
6057545
6124318
6182372
6340279
6361214
6375973
6376199
6466046
6519675
6561388
6564440
6605492
6734974
A_44_P323591
GE1217013
GO:0000122
GO:0000791
GO:0001711
GO:0001826
GO:0001829
GO:0001832
GO:0001835
GO:0002376
GO:0005515
GO:0005634
GO:0005654
GO:0005694
GO:0006325
GO:0006351
GO:0006355
GO:0006368
GO:0007259
GO:0016570
GO:0016593
GO:0019827
GO:0023052
GO:0030154
GO:0036211
GO:0042169
GO:0043226
GO:0045638
GO:0045814
GO:0045944
GO:0048856
GO:0070102
GO:0071222
H33842_at
ILMN_1373470
PH_rn_0017954
rc_AA900688_at
Participates
as a component of
PAF1C [nucleoplasm] (Rattus norvegicus)
Inferred From
CTR9 [nucleoplasm]
(Homo sapiens)
Cross References
Ensembl
ENSRNOG00000017195
,
ENSRNOT00000118872
,
ENSRNOP00000085772
RGD
1311097
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