Reactome | DDX39A [nucleoplasm]

DDX39A [nucleoplasm]

Stable Identifier

R-RNO-8852237

Type

Protein [EntityWithAccessionedSequence]

Species

Rattus norvegicus

Compartment

nucleoplasm

Synonyms

Q5U216

Locations in the PathwayBrowser

Expand all

Gene expression (Transcription) (Rattus norvegicus)

- RNA Polymerase II Transcription (Rattus norvegicus)
  - RNA Polymerase II Transcription Termination (Rattus norvegicus)
    - Cleavage of mRNA at the 3'-end (Rattus norvegicus)
      - 3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
        
        TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
        
        DDX39B:ATP [nucleoplasm] (Rattus norvegicus)
        
        DDX39A,B [nucleoplasm] (Rattus norvegicus)
        
        DDX39A [nucleoplasm] (Rattus norvegicus)
      - Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Rattus norvegicus)
        
        TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
        
        DDX39B:ATP [nucleoplasm] (Rattus norvegicus)
        
        DDX39A,B [nucleoplasm] (Rattus norvegicus)
        
        DDX39A [nucleoplasm] (Rattus norvegicus)

Metabolism of RNA (Rattus norvegicus)

- Processing of Capped Intron-Containing Pre-mRNA (Rattus norvegicus)
  - Transport of Mature Transcript to Cytoplasm (Rattus norvegicus)
    - Transport of Mature mRNA derived from an Intron-Containing Transcript (Rattus norvegicus)
      - NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Rattus norvegicus)
        
        DDX39A,B [nucleoplasm] (Rattus norvegicus)
        
        DDX39A [nucleoplasm] (Rattus norvegicus)
        
        DDX39B:ADP [nucleoplasm] (Rattus norvegicus)
        
        DDX39A,B [nucleoplasm] (Rattus norvegicus)
        
        DDX39A [nucleoplasm] (Rattus norvegicus)
        
        polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
        
        TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
        
        DDX39B:ATP [nucleoplasm] (Rattus norvegicus)
        
        DDX39A,B [nucleoplasm] (Rattus norvegicus)
        
        DDX39A [nucleoplasm] (Rattus norvegicus)
  - mRNA 3'-end processing (Rattus norvegicus)
    - Cleavage of mRNA at the 3'-end (Rattus norvegicus)
      - 3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
        
        TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
        
        DDX39B:ATP [nucleoplasm] (Rattus norvegicus)
        
        DDX39A,B [nucleoplasm] (Rattus norvegicus)
        
        DDX39A [nucleoplasm] (Rattus norvegicus)
      - Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Rattus norvegicus)
        
        TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
        
        DDX39B:ATP [nucleoplasm] (Rattus norvegicus)
        
        DDX39A,B [nucleoplasm] (Rattus norvegicus)
        
        DDX39A [nucleoplasm] (Rattus norvegicus)
    - mRNA polyadenylation (Rattus norvegicus)
      - 3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
        
        TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
        
        DDX39B:ATP [nucleoplasm] (Rattus norvegicus)
        
        DDX39A,B [nucleoplasm] (Rattus norvegicus)
        
        DDX39A [nucleoplasm] (Rattus norvegicus)
      - polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
        
        TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
        
        DDX39B:ATP [nucleoplasm] (Rattus norvegicus)
        
        DDX39A,B [nucleoplasm] (Rattus norvegicus)
        
        DDX39A [nucleoplasm] (Rattus norvegicus)

External Reference Information

External Reference

UniProt:Q5U216

Reference Genes

BioGPS Gene:89827

ENSEMBL:ENSRNOG00000004373

ENSEMBL:ENSRNOG00000004373.7

ENSEMBL:ENSRNOG00055008421

ENSEMBL:ENSRNOG00060013193

ENSEMBL:ENSRNOG00065009645

KEGG Gene (Rattus norvegicus):89827

Monarch:89827

NCBI Gene:89827

Reference Transcript

Other Identifiers

10810264

1387048_at

17610297

17732714

5780292

5932342

5981376

6030778

6175293

6236712

6296408

6299678

6366951

6562937

6713059

6713286

89827

AF063447_at

A_44_P149412

GE13277

GO:0003676

GO:0003724

GO:0003824

GO:0005524

GO:0140098

GO:0140657

PH_rn_0013998

Participates

as a member of

DDX39A,B [nucleoplasm] (Rattus norvegicus)

Inferred From

DDX39A [nucleoplasm] (Homo sapiens)

Cross References

RefSeq

XP_006255376.1, NP_446015.2

Ensembl

ENSRNOP00000068949, ENSRNOT00000090312, ENSRNOG00000004373

PRO

Q5U216

RGD

619920