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DDX39B [nucleoplasm]
Stable Identifier
R-RNO-8849139
Type
Protein [EntityWithAccessionedSequence]
Species
Rattus norvegicus
Compartment
nucleoplasm
Synonyms
Q63413
Locations in the PathwayBrowser
Expand all
Gene expression (Transcription) (Rattus norvegicus)
RNA Polymerase II Transcription (Rattus norvegicus)
RNA Polymerase II Transcription Termination (Rattus norvegicus)
Cleavage of mRNA at the 3'-end (Rattus norvegicus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
DDX39B:ATP [nucleoplasm] (Rattus norvegicus)
DDX39A,B [nucleoplasm] (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
DDX39B:ATP [nucleoplasm] (Rattus norvegicus)
DDX39A,B [nucleoplasm] (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
Metabolism of RNA (Rattus norvegicus)
Processing of Capped Intron-Containing Pre-mRNA (Rattus norvegicus)
Transport of Mature Transcript to Cytoplasm (Rattus norvegicus)
Transport of Mature mRNA derived from an Intron-Containing Transcript (Rattus norvegicus)
NXF1:NXT1 (TAP:p15) binds capped mRNA:CBC:EJC:TREX (minus DDX39B) (Rattus norvegicus)
DDX39A,B [nucleoplasm] (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
DDX39B:ADP [nucleoplasm] (Rattus norvegicus)
DDX39A,B [nucleoplasm] (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
DDX39B:ATP [nucleoplasm] (Rattus norvegicus)
DDX39A,B [nucleoplasm] (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
mRNA 3'-end processing (Rattus norvegicus)
Cleavage of mRNA at the 3'-end (Rattus norvegicus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
DDX39B:ATP [nucleoplasm] (Rattus norvegicus)
DDX39A,B [nucleoplasm] (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
Spliced mRNA:CBC:EJC:TREX [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
DDX39B:ATP [nucleoplasm] (Rattus norvegicus)
DDX39A,B [nucleoplasm] (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
mRNA polyadenylation (Rattus norvegicus)
3' end cleaved, ligated exon containing complex [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
DDX39B:ATP [nucleoplasm] (Rattus norvegicus)
DDX39A,B [nucleoplasm] (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
polyadenylated, capped mRNA:CBC:EJC:TREX:SRSF proteins [nucleoplasm] (Rattus norvegicus)
TREX (DDX39B:ATP) [nucleoplasm] (Rattus norvegicus)
DDX39B:ATP [nucleoplasm] (Rattus norvegicus)
DDX39A,B [nucleoplasm] (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
mRNA Splicing (Rattus norvegicus)
mRNA Splicing - Major Pathway (Rattus norvegicus)
Formation of the Spliceosomal B complex (Rattus norvegicus)
Spliceosomal B complex [nucleoplasm] (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
Spliceosomal Pre-B complex [nucleoplasm] (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal C* complex (Rattus norvegicus)
Spliceosomal C complex [nucleoplasm] (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
Formation of the Spliceosomal P complex and exon ligation (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
DDX39B [nucleoplasm] (Rattus norvegicus)
External Reference Information
External Reference
UniProt:Q63413
Reference Genes
BioGPS Gene:114612
ENSEMBL:ENSRNOG00000000841
ENSEMBL:ENSRNOG00000000841.8
ENSEMBL:ENSRNOG00055007825
ENSEMBL:ENSRNOG00060003574
KEGG Gene (Rattus norvegicus):114612
Monarch:114612
NCBI Gene:114612
UCSC:Q63413
Reference Transcript
RefSeq:NM_133300.3
Other Identifiers
10831135
114612
1388158_at
17756321
5693499
5714394
5849634
5935715
5978940
5986803
6167879
6177293
6582573
6603032
6642838
6744998
GE1272035
GO:0003676
GO:0003724
GO:0003824
GO:0005524
GO:0140098
GO:0140657
ILMN_1363985
PH_rn_0015047
rc_AA892014_s_at
Participates
as a component of
Spliceosomal Bact complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal B complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal Pre-B complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal C complex [nucleoplasm] (Rattus norvegicus)
Spliceosomal C* complex [nucleoplasm] (Rattus norvegicus)
as an output of
Formation of the Spliceosomal P complex and exon ligation (Rattus norvegicus)
as a member of
DDX39A,B [nucleoplasm] (Rattus norvegicus)
Other forms of this molecule
DDX39B [cytosol]
Inferred From
DDX39B [nucleoplasm]
(Homo sapiens)
Cross References
RefSeq
NP_579834.2
Ensembl
ENSRNOT00000001115
,
ENSRNOP00000001115
,
ENSRNOG00000000841
PRO
Q63413
RGD
70923
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